Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2670
Gene Symbol: GFAP
GFAP
0.020 Biomarker disease BEFREE Histologic diagnosis of pleomorphic xanthoastrocytoma was made because, in addition to the unique pleomorphic histologic features, positive glial fibrillary acidic protein in immunohistochemical staining and characteristic ultrastructural features, i.e., cytoplasmic intermediate fibrils and lipid vacuoles, basal lamina, and abundant reticulin networks were demonstrated. 1855184 1991
Entrez Id: 7841
Gene Symbol: MOGS
MOGS
0.010 GeneticVariation disease BEFREE We report a pleomorphic xanthoastrocytoma with an abnormal clonal cell line of 48,XY, +3, +5, -20, -22, +der(7)t(7;?)(p22;?), +der(20)t(15;20)(q11;q13). 1933824 1991
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation disease BEFREE Single-strand conformation polymorphism analysis of p53 exons 5-8 revealed migration shifts in two cases, one primary PXA without recurrence and one recurrent grade II PXA in which the primary tumor did not show a shift. 8834542 1996
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation disease BEFREE In the present study, we performed immunostaining for p53 protein and examined the mutation status of exons 5-8 of the p53 gene in 55 PXAs, 8 of which had undergone one or multiple recurrences. 11523567 2001
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation disease BEFREE Only 3 PXAs (5%) carried a TP53 mutation. 12484572 2002
Entrez Id: 947
Gene Symbol: CD34
CD34
0.040 Biomarker disease BEFREE Therefore, immunostaining for CD34 may be a helpful tool for the histological differential diagnosis of PXAs. 12624789 2003
Entrez Id: 4193
Gene Symbol: MDM2
MDM2
0.010 Biomarker disease BEFREE These results suggest that accumulation of MDM2 without gene amplification may be one of the major molecular events occurring in the tumorigenesis of PXA. 15144396 2004
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.060 Biomarker disease BEFREE Taken together, our study identifies loss of chromosome 9 as the most common chromosomal imbalance in PXAs and suggests important roles for homozygous CDKN2A/p14(ARF)/CDKN2B deletion as well as low TSC1 mRNA expression in these tumors. 16909113 2007
Entrez Id: 7248
Gene Symbol: TSC1
TSC1
0.010 AlteredExpression disease BEFREE However, PXAs consistently showed low TSC1 transcript levels. 16909113 2007
Entrez Id: 1030
Gene Symbol: CDKN2B
CDKN2B
0.010 GeneticVariation disease BEFREE Analysis of 10 PXAs with available high molecular weight DNA by high-resolution array-based CGH indicated homozygous 9p21.3 deletions involving the CDKN2A/p14(ARF)/CDKN2B loci in six tumors (60%). 16909113 2007
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation disease BEFREE We suggest that the incidence of TP53 mutations in pleomorphic xanthoastrocytoma may be underestimated and that molecular approaches should be used for greater diagnostic precision. 19665069 2009
Entrez Id: 6598
Gene Symbol: SMARCB1
SMARCB1
0.030 Biomarker disease BEFREE We analyzed a loss of heterozygosity and mutations of the SMARCB1 (also known as SNF5 or INI1) and TP53 genes in four cases of PXA. 19665069 2009
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 Biomarker disease BEFREE BRAF duplication was not detected in any of the PXA cases. 21479234 2011
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.020 PosttranslationalModification disease BEFREE Thus, MGMT promoter methylation is not frequent in PXA and our results raise doubts about the benefits of treating indistinctly aggressive PXA with TMZ. 21626073 2011
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.010 GeneticVariation disease BEFREE The expression of MIF and interleukin 8 (IL-8) was evaluated in 36 high-grade gliomas (20 glioblastoma multiforme, 13 anaplastic astrocytoma, and 3 anaplastic oligoastrocytoma) and 32 low-grade gliomas (18 fibrillary astrocytoma, 5 pilocytic astrocytoma, 5 oligodendroglioma, 3 ependymoma and 1 pleomorphic xanthoastrocytoma) by immunostaining. 21725855 2012
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE We evaluated the immunohistochemical (IHC) detection of BRAF V600E mutation in PXA by comparing to gold standard molecular analysis and investigating the interobserver variability of the IHC scoring. 24252190 2013
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE Four adults [2 males; 2 female: median age 45 years (range 34-53)] with surgery, radiation and alkylator refractory recurrent PXA demonstrating the BRAF mutation (V600E) were treated with vemurafenib. 23756728 2013
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE BRAF-mutated pleomorphic xanthoastrocytoma is associated with temporal location, reticulin fiber deposition and CD34 expression. 24345274 2014
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE Composite pleomorphic xanthoastrocytoma-epithelioid glioneuronal tumor with BRAF V600E mutation - report of three cases. 24321241 2014
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE These findings suggest that epithelioid GBM may arise from a PXA with a BRAF V600E mutation. 24894018 2014
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE Although this glioma was difficult to clarify, diagnosis of pleomorphic xanthoastrocytoma with anaplastic feature was suggested based on the association of some pathological feature (eosinophilic granular bodies, reticulin network and diffuse CD34 expression) and the BRAF V600E mutation. 24857351 2014
Entrez Id: 947
Gene Symbol: CD34
CD34
0.040 GeneticVariation disease BEFREE Although this glioma was difficult to clarify, diagnosis of pleomorphic xanthoastrocytoma with anaplastic feature was suggested based on the association of some pathological feature (eosinophilic granular bodies, reticulin network and diffuse CD34 expression) and the BRAF V600E mutation. 24857351 2014
Entrez Id: 947
Gene Symbol: CD34
CD34
0.040 AlteredExpression disease BEFREE BRAF-mutated pleomorphic xanthoastrocytoma is associated with temporal location, reticulin fiber deposition and CD34 expression. 24345274 2014
Entrez Id: 9020
Gene Symbol: MAP3K14
MAP3K14
0.010 GeneticVariation disease BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018 2014
Entrez Id: 65061
Gene Symbol: CDK15
CDK15
0.010 GeneticVariation disease BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018 2014