Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE Pleomorphic xanthoastrocytoma is a rare brain tumor with unique high frequency of BRAF V600E mutation which is plausible for targeted therapy. 29200156 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 Biomarker disease BEFREE BRAF duplication was not detected in any of the PXA cases. 21479234 2011
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE BRAF-mutated pleomorphic xanthoastrocytoma is associated with temporal location, reticulin fiber deposition and CD34 expression. 24345274 2014
Entrez Id: 55714
Gene Symbol: TENM3
TENM3
0.010 GeneticVariation disease BEFREE ODZ3 deletion was detected in seven eGBMs and two ePXAs.EGFR amplification was absent. 26238627 2016
Entrez Id: 10178
Gene Symbol: TENM1
TENM1
0.010 GeneticVariation disease BEFREE ODZ3 deletion was detected in seven eGBMs and two ePXAs.EGFR amplification was absent. 26238627 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE BRAF V600E mutation was present in four eGBMs and four ePXAs. 26238627 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE BRAF V600E mutations are found frequently in circumscribed low-grade gliomas such as pleomorphic xanthoastrocytoma (PXA) and extra-cerebellar pilocytic astrocytoma, or epithelioid glioblastomas (E-GBM), a rare variant of GBM. 26445861 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE BRAF mutation and anaplasia may be predictive factors of progression-free survival in adult pleomorphic xanthoastrocytoma. 26454767 2015
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.020 PosttranslationalModification disease BEFREE MGMT promoter hypermethylation was observed in 3 out of 20 PXA compared to 14 out of 34 gcGBM (15% vs. 41.2%, p-value 0.09). 27253461 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE BRAF mutations are most frequently detected in certain subtypes of low-grade glioma, such as pilocytic astrocytoma (PA), pleomorphic xanthoastrocytoma (PXA), ganglioglioma (GG) and dysembryoplastic neuroepithelial tumor (DNT). 27792249 2017
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.060 GeneticVariation disease BEFREE CDKN2A/B deletion was present in similar proportion of PXA (83%), A-PXA (93%), BRAF V600E (87%), and wild-type (87%) tumors. 28181325 2018
Entrez Id: 5817
Gene Symbol: PVR
PVR
0.010 AlteredExpression disease BEFREE CD155 was expressed in all 12 patient specimens and in PXA and medulloblastoma cell lines. 29878245 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE A BRAF V600E mutation and homozygous deletion of CDKN2A/B were observed, which is similar to the genetic features of PXA or epithelioid glioblastoma, but the additional loss of ATRX nuclear immunoreactivity and absence of TERT promoter mutation were unusual findings, indicating a novel genetic profile. 30972500 2019
Entrez Id: 9020
Gene Symbol: MAP3K14
MAP3K14
0.010 GeneticVariation disease BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018 2014
Entrez Id: 65061
Gene Symbol: CDK15
CDK15
0.010 GeneticVariation disease BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018 2014
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.010 GeneticVariation disease BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018 2014
Entrez Id: 5568
Gene Symbol: PRKACG
PRKACG
0.010 GeneticVariation disease BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018 2014
Entrez Id: 5127
Gene Symbol: CDK16
CDK16
0.010 GeneticVariation disease BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018 2014
Entrez Id: 9874
Gene Symbol: TLK1
TLK1
0.010 GeneticVariation disease BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018 2014
Entrez Id: 55872
Gene Symbol: PBK
PBK
0.010 GeneticVariation disease BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018 2014
Entrez Id: 22858
Gene Symbol: CILK1
CILK1
0.010 GeneticVariation disease BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018 2014
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.060 GeneticVariation disease BEFREE A BRAF V600E mutation and homozygous deletion of CDKN2A/B were observed, which is similar to the genetic features of PXA or epithelioid glioblastoma, but the additional loss of ATRX nuclear immunoreactivity and absence of TERT promoter mutation were unusual findings, indicating a novel genetic profile. 30972500 2019
Entrez Id: 5609
Gene Symbol: MAP2K7
MAP2K7
0.010 GeneticVariation disease BEFREE Additionally, a trial of a MEK inhibitor or tyrosine kinase inhibitor could be considered for PXA regardless of V600E mutation status. 30120661 2018
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.050 GeneticVariation disease BEFREE All PXA in this cohort were IDH and histone H3 wildtype, and did not contain alterations in EGFR. 30051528 2019
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.030 GeneticVariation disease BEFREE All PXA in this cohort were IDH and histone H3 wildtype, and did not contain alterations in EGFR. 30051528 2019