Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 GeneticVariation disease BEFREE Prior studies have shown that TP53 mutations may occur in up to 25% of PXAs, suggesting that PXA may have an etiology similar to diffuse astrocytoma rather than pilocytic astrocytoma. 11523567 2001
Entrez Id: 6855
Gene Symbol: SYP
SYP
0.010 Biomarker disease BEFREE Histologically, nodules of small neuronal tumor cells immunoreactive for synaptophysin and NeuN were embedded within a diffuse astrocytoma. 11484825 2001
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 Biomarker disease BEFREE However this was not observed in p53 +ve GBM or in low grade DA either p53 positive or negative. 15981097 2005
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 AlteredExpression disease BEFREE The lack of large, whole-arm 1p/19q losses (such as those found in oligodendroglial tumors), aberrant p53 expression, and the predominance of astroglial components may indicate a biologic relationship of the GTNI to diffuse astrocytoma. 17667543 2007
Entrez Id: 3485
Gene Symbol: IGFBP2
IGFBP2
0.010 AlteredExpression disease BEFREE The mean transcript levels of IGFBP-2 and -3 were significantly higher in glioblastomas (GBM) relative to anaplastic astrocytoma (AA), diffuse astrocytoma (DA), and controls whereas IGFBP-5 mRNA was higher in GBM relative to AA and controls (P < 0.05). 20501753 2010
Entrez Id: 3488
Gene Symbol: IGFBP5
IGFBP5
0.010 GeneticVariation disease BEFREE The mean transcript levels of IGFBP-2 and -3 were significantly higher in glioblastomas (GBM) relative to anaplastic astrocytoma (AA), diffuse astrocytoma (DA), and controls whereas IGFBP-5 mRNA was higher in GBM relative to AA and controls (P < 0.05). 20501753 2010
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE To validate mutation frequency, IDH1 gene at codon 132 was sequenced in 74 diffusely infiltrating astrocytomas: diffuse astrocytoma (DA; World Health Organization [WHO] grade II), anaplastic astrocytoma (AA; WHO grade III), and GBM (WHO grade IV). 22904127 2012
Entrez Id: 4603
Gene Symbol: MYBL1
MYBL1
0.020 Biomarker disease BEFREE Recent identification of activating re-arrangements in c-MYB and MYBL1 in pediatric diffuse astrocytoma also provide candidates for therapeutic intervention. 23881924 2013
Entrez Id: 4603
Gene Symbol: MYBL1
MYBL1
0.020 Biomarker disease BEFREE Whole-genome sequencing of a MYBL1-rearranged diffuse astrocytoma grade II demonstrated MYBL1 tandem duplication and few other events. 23633565 2013
Entrez Id: 2173
Gene Symbol: FABP7
FABP7
0.010 Biomarker disease BEFREE Double immunostaining for FABP7 and Sox2 showed that FABP7(+) Sox2(+) tumor cells were significantly increased in glioblastoma (grade IV) compared with diffuse astrocytoma (grade II) and anaplastic astrocytoma (grade III). 24274717 2013
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.010 Biomarker disease BEFREE Double immunostaining for FABP7 and Sox2 showed that FABP7(+) Sox2(+) tumor cells were significantly increased in glioblastoma (grade IV) compared with diffuse astrocytoma (grade II) and anaplastic astrocytoma (grade III). 24274717 2013
Entrez Id: 8091
Gene Symbol: HMGA2
HMGA2
0.010 AlteredExpression disease BEFREE Expression of HMGA2 protein was significantly higher in glioblastoma multiforme (World Health Organization [WHO] grade IV; P = .007) and anaplastic astrocytoma (WHO grade III; P = .037) than in diffuse astrocytoma (WHO grade II). 24935062 2014
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE A better prognosis was significantly associated with combined IDH1 mutation and MGMT methylation status (both positive vs both negative, HR 0.079 [95% CI 0.008-0.579], p=0.012), as well as histology (OG vs DA and OA, HR 0.158 [95% CI 0.022-0.674], p=0.011) and tumor size (<6 cm vs ≥6 cm, HR 0.120 [95% CI 0.017-0.595], p=0.008). 26276726 2015
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE Somatic mutations in the isocitrate dehydrogenase 1 or 2 (IDH1/IDH2) genes were detected in 96% of LGO and 91% of LGA. 26303387 2015
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE IDH1 mutation is prognostic for diffuse astrocytoma but not low-grade oligodendrogliomas in patients not treated with early radiotherapy. 26243269 2015
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.050 GeneticVariation disease BEFREE Somatic mutations in the isocitrate dehydrogenase 1 or 2 (IDH1/IDH2) genes were detected in 96% of LGO and 91% of LGA. 26303387 2015
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.020 PosttranslationalModification disease BEFREE The O-6-methylguanine-DNA-methyltransferase (MGMT) promoter was methylated in 83% of LGO and 59% of LGA. 26303387 2015
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.020 GeneticVariation disease BEFREE A better prognosis was significantly associated with combined IDH1 mutation and MGMT methylation status (both positive vs both negative, HR 0.079 [95% CI 0.008-0.579], p=0.012), as well as histology (OG vs DA and OA, HR 0.158 [95% CI 0.022-0.674], p=0.011) and tumor size (<6 cm vs ≥6 cm, HR 0.120 [95% CI 0.017-0.595], p=0.008). 26276726 2015
Entrez Id: 27030
Gene Symbol: MLH3
MLH3
0.010 PosttranslationalModification disease BEFREE MutL homolog 3 (MLH3) promoter methylation was observed in 61% of LGO and 27% of LGA. 26303387 2015
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 Biomarker disease BEFREE The majority of glioblastomas develop rapidly with a short clinical history (primary glioblastoma IDH wild-type), whereas secondary glioblastomas progress from diffuse astrocytoma or anaplastic astrocytoma. 26443480 2016
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.050 Biomarker disease BEFREE The majority of glioblastomas develop rapidly with a short clinical history (primary glioblastoma IDH wild-type), whereas secondary glioblastomas progress from diffuse astrocytoma or anaplastic astrocytoma. 26443480 2016
Entrez Id: 1030
Gene Symbol: CDKN2B
CDKN2B
0.010 GeneticVariation disease BEFREE Deletion of CDKN2A and CDKN2B loci was found both in diffuse astrocytoma and glioblastoma component, but no other significant alterations were found. 26404554 2016
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.010 GeneticVariation disease BEFREE Deletion of CDKN2A and CDKN2B loci was found both in diffuse astrocytoma and glioblastoma component, but no other significant alterations were found. 26404554 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.010 GeneticVariation disease BEFREE Malignant transformation of diffuse astrocytoma to glioblastoma associated with newly developed BRAF V600E mutation. 26404554 2016
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE Furthermore, both ATP2A2 overexpression and IDH1 mutation were detected in secondary glioblastoma, AA developed from DA and oligodendrogiomas with IDH1 mutation. 28339043 2017