Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE The diagnosis was IDH-mutated diffuse astrocytoma, WHO grade II. 30079885 2019
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE For each histopathologic diagnosis, the number of cases and positive rate of c-Met expression are as follows: oligodendroglioma, IDH-mutant, and 1p19q codeletion (OD): 16 cases, 6.3%; anaplastic oligodendroglioma, IDH-mutant, and 1p19q codeletion (AO): 11 cases, 36.4%; diffuse astrocytoma (DA), IDH-mutant: 21 cases, 28.6%; anaplastic astrocytoma (AA), IDH- mutant: 15 cases, 20%; glioblastoma, IDH-mutant: 2, 100%, DA, IDH-wildtype: 9 cases, 33.3%; AA, IDH-wildtype: 20 cases, 30.0%; and glioblastoma, IDH-wildtype: 59 cases, 52.5%. c-Met expression was correlated with progression-free survival in oligodendroglial tumors and glioblastoma, IDH-wildtype. 30878754 2019
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE Identification of time-to-peak on dynamic 18F-FET-PET as a prognostic marker specifically in IDH1/2 mutant diffuse astrocytoma. 29016996 2018
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE In 2 cases, there was divergent evolution of IDH1-mutated and 1p/19q-codeleted oligodendroglioma and IDH1-mutated and 1p/19q-intact diffuse astrocytoma, occurring synchronously in one case and metachronously in a second. 29077933 2018
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE Furthermore, both ATP2A2 overexpression and IDH1 mutation were detected in secondary glioblastoma, AA developed from DA and oligodendrogiomas with IDH1 mutation. 28339043 2017
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE Diffuse astrocytoma (DA), anaplastic astrocytoma (AA), and glioblastoma (GBM) are defined by the World Health Organization (WHO) based on IDH-mutational status. 28110298 2017
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 Biomarker disease BEFREE The majority of glioblastomas develop rapidly with a short clinical history (primary glioblastoma IDH wild-type), whereas secondary glioblastomas progress from diffuse astrocytoma or anaplastic astrocytoma. 26443480 2016
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE A better prognosis was significantly associated with combined IDH1 mutation and MGMT methylation status (both positive vs both negative, HR 0.079 [95% CI 0.008-0.579], p=0.012), as well as histology (OG vs DA and OA, HR 0.158 [95% CI 0.022-0.674], p=0.011) and tumor size (<6 cm vs ≥6 cm, HR 0.120 [95% CI 0.017-0.595], p=0.008). 26276726 2015
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE Somatic mutations in the isocitrate dehydrogenase 1 or 2 (IDH1/IDH2) genes were detected in 96% of LGO and 91% of LGA. 26303387 2015
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE IDH1 mutation is prognostic for diffuse astrocytoma but not low-grade oligodendrogliomas in patients not treated with early radiotherapy. 26243269 2015
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.100 GeneticVariation disease BEFREE To validate mutation frequency, IDH1 gene at codon 132 was sequenced in 74 diffusely infiltrating astrocytomas: diffuse astrocytoma (DA; World Health Organization [WHO] grade II), anaplastic astrocytoma (AA; WHO grade III), and GBM (WHO grade IV). 22904127 2012
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.050 GeneticVariation disease BEFREE The diagnosis was IDH-mutated diffuse astrocytoma, WHO grade II. 30079885 2019
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.050 GeneticVariation disease BEFREE For each histopathologic diagnosis, the number of cases and positive rate of c-Met expression are as follows: oligodendroglioma, IDH-mutant, and 1p19q codeletion (OD): 16 cases, 6.3%; anaplastic oligodendroglioma, IDH-mutant, and 1p19q codeletion (AO): 11 cases, 36.4%; diffuse astrocytoma (DA), IDH-mutant: 21 cases, 28.6%; anaplastic astrocytoma (AA), IDH- mutant: 15 cases, 20%; glioblastoma, IDH-mutant: 2, 100%, DA, IDH-wildtype: 9 cases, 33.3%; AA, IDH-wildtype: 20 cases, 30.0%; and glioblastoma, IDH-wildtype: 59 cases, 52.5%. c-Met expression was correlated with progression-free survival in oligodendroglial tumors and glioblastoma, IDH-wildtype. 30878754 2019
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.050 GeneticVariation disease BEFREE Diffuse astrocytoma (DA), anaplastic astrocytoma (AA), and glioblastoma (GBM) are defined by the World Health Organization (WHO) based on IDH-mutational status. 28110298 2017
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.050 Biomarker disease BEFREE The majority of glioblastomas develop rapidly with a short clinical history (primary glioblastoma IDH wild-type), whereas secondary glioblastomas progress from diffuse astrocytoma or anaplastic astrocytoma. 26443480 2016
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.050 GeneticVariation disease BEFREE Somatic mutations in the isocitrate dehydrogenase 1 or 2 (IDH1/IDH2) genes were detected in 96% of LGO and 91% of LGA. 26303387 2015
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 AlteredExpression disease BEFREE The lack of large, whole-arm 1p/19q losses (such as those found in oligodendroglial tumors), aberrant p53 expression, and the predominance of astroglial components may indicate a biologic relationship of the GTNI to diffuse astrocytoma. 17667543 2007
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 Biomarker disease BEFREE However this was not observed in p53 +ve GBM or in low grade DA either p53 positive or negative. 15981097 2005
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 GeneticVariation disease BEFREE Prior studies have shown that TP53 mutations may occur in up to 25% of PXAs, suggesting that PXA may have an etiology similar to diffuse astrocytoma rather than pilocytic astrocytoma. 11523567 2001
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.020 PosttranslationalModification disease BEFREE The O-6-methylguanine-DNA-methyltransferase (MGMT) promoter was methylated in 83% of LGO and 59% of LGA. 26303387 2015
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.020 GeneticVariation disease BEFREE A better prognosis was significantly associated with combined IDH1 mutation and MGMT methylation status (both positive vs both negative, HR 0.079 [95% CI 0.008-0.579], p=0.012), as well as histology (OG vs DA and OA, HR 0.158 [95% CI 0.022-0.674], p=0.011) and tumor size (<6 cm vs ≥6 cm, HR 0.120 [95% CI 0.017-0.595], p=0.008). 26276726 2015
Entrez Id: 4603
Gene Symbol: MYBL1
MYBL1
0.020 Biomarker disease BEFREE Recent identification of activating re-arrangements in c-MYB and MYBL1 in pediatric diffuse astrocytoma also provide candidates for therapeutic intervention. 23881924 2013
Entrez Id: 4603
Gene Symbol: MYBL1
MYBL1
0.020 Biomarker disease BEFREE Whole-genome sequencing of a MYBL1-rearranged diffuse astrocytoma grade II demonstrated MYBL1 tandem duplication and few other events. 23633565 2013
Entrez Id: 5978
Gene Symbol: REST
REST
0.010 AlteredExpression disease BEFREE Means of relative expression for REST were as follows: 0.7898, 0.7606, and 0.7318 in DA, AO, and GBM groups, respectively. 27685921 2017
Entrez Id: 3627
Gene Symbol: CXCL10
CXCL10
0.010 GeneticVariation disease BEFREE 50.7% of GBM and 24.5% of DA showed strong immunoexpression of CXCL10. 27461653 2017