Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1799724
rs1799724
LTA ; TNF
47 0.600 0.680 6 31574705 upstream gene variant C/T snv 8.5E-02 0.010 1.000 1 2019 2019
dbSNP: rs12189871
rs12189871
HLA-B
2 0.925 0.080 6 31284147 intron variant C/T snv 8.6E-02 0.010 1.000 1 2015 2015
dbSNP: rs1801282
rs1801282
PPARG
131 0.500 0.840 3 12351626 missense variant C/G snv 0.11 8.9E-02 0.020 1.000 2 2006 2014
dbSNP: rs33980500
rs33980500
TRAF3IP2 ; TRAF3IP2-AS1
14 0.742 0.200 6 111592059 missense variant C/T snv 8.6E-02 9.7E-02 0.820 1.000 4 2010 2015
dbSNP: rs9378127
rs9378127
HLA-DMA
1 1.000 0.080 6 32954682 intron variant G/A snv 0.11 0.700 1.000 1 2019 2019
dbSNP: rs12191877
rs12191877
HLA-B
7 0.851 0.120 6 31285148 intron variant C/T snv 0.12 0.700 1.000 1 2015 2015
dbSNP: rs13191343
rs13191343
HLA-B ; HLA-C
1 1.000 0.080 6 31273332 intron variant C/G;T snv 0.13 0.800 1.000 1 2010 2010
dbSNP: rs1800629
rs1800629
TNF
169 0.472 0.920 6 31575254 upstream gene variant G/A snv 0.12 0.14 0.020 1.000 2 2018 2019
dbSNP: rs12356475
rs12356475
CTNNA3
1 1.000 0.080 10 66001962 intron variant T/C snv 0.15 0.700 1.000 1 2015 2015
dbSNP: rs4683946
rs4683946 		2 0.925 0.080 3 101896982 intron variant G/T snv 0.19 0.700 1.000 1 2015 2015
dbSNP: rs2621322
rs2621322 		1 1.000 0.080 6 32820935 intron variant T/G snv 0.20 0.700 1.000 1 2019 2019
dbSNP: rs1610601
rs1610601
HLA-F ; HLA-F-AS1
1 1.000 0.080 6 29732406 intron variant C/A;T snv 0.20 0.700 1.000 1 2019 2019
dbSNP: rs2066808
rs2066808
STAT2
8 0.807 0.280 12 56344189 intron variant A/G snv 0.21 0.020 1.000 2 2013 2019
dbSNP: rs13017599
rs13017599
NONOP2
3 0.882 0.160 2 60937196 non coding transcript exon variant G/A snv 0.25 0.810 1.000 3 2012 2015
dbSNP: rs3212227
rs3212227
IL12B
65 0.566 0.840 5 159315942 3 prime UTR variant T/G snv 0.26 0.040 1.000 4 2008 2019
dbSNP: rs2275913
rs2275913
IL17A
105 0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28 0.010 1.000 1 2018 2018
dbSNP: rs6887695
rs6887695 		14 0.732 0.440 5 159395637 intron variant G/C snv 0.35 0.050 1.000 5 2008 2019
dbSNP: rs702873
rs702873
LINC01185
3 0.882 0.120 2 60854407 intron variant C/T snv 0.35 0.810 1.000 1 2012 2012
dbSNP: rs4655683
rs4655683
IL23R ; C1orf141
1 1.000 0.080 1 67145930 intron variant G/A snv 0.37 0.700 1.000 1 2019 2019
dbSNP: rs767455
rs767455
TNFRSF1A
13 0.742 0.400 12 6341779 synonymous variant T/C snv 0.37 0.40 0.010 1.000 1 2012 2012
dbSNP: rs9321623
rs9321623 		2 0.925 0.080 6 137637128 regulatory region variant C/T snv 0.43 0.010 1.000 1 2015 2015
dbSNP: rs20575
rs20575
TNFRSF10A
29 0.645 0.440 8 23201811 missense variant C/G snv 0.54 0.44 0.010 1.000 1 2012 2012
dbSNP: rs12883343
rs12883343 		2 0.925 0.080 14 35383268 downstream gene variant C/G;T snv 0.47 0.010 1.000 1 2019 2019
dbSNP: rs744166
rs744166
STAT3
22 0.689 0.560 17 42362183 intron variant A/G snv 0.48 0.010 1.000 1 2013 2013
dbSNP: rs2248374
rs2248374
ERAP1 ; ERAP2
4 0.851 0.120 5 96900192 splice region variant A/G snv 0.55 0.54 0.010 1.000 1 2016 2016