Source: GWASDB ×
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs7850258
rs7850258
PTCSC2
3 0.827 0.200 9 97786731 intron variant A/G snv 0.72 0.820 1.000 2 2011 2019
dbSNP: rs925489
rs925489
PTCSC2
5 0.882 0.080 9 97784318 intron variant C/T snv 0.71 0.800 1.000 2 2011 2012
dbSNP: rs17020055
rs17020055
VAV3
1 1.000 0.040 1 107793911 intron variant A/C snv 0.11 0.800 1.000 1 2012 2016
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
13 0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 0.800 1.000 1 2012 2019
dbSNP: rs2517532
rs2517532 		2 0.925 0.120 6 31050630 upstream gene variant A/G snv 0.60 0.800 1.000 1 2012 2012
dbSNP: rs3129720
rs3129720 		4 0.851 0.280 6 32695854 intergenic variant T/C snv 0.76 0.800 1.000 1 2012 2012
dbSNP: rs3184504
rs3184504
ATXN2 ; SH2B3
24 0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 0.800 1.000 1 2012 2019
dbSNP: rs4915077
rs4915077
VAV3
1 1.000 0.040 1 107823394 intron variant T/C snv 9.0E-02 0.800 1.000 1 2012 2012
dbSNP: rs6679677
rs6679677
PHTF1
6 0.653 0.320 1 113761186 upstream gene variant C/A snv 6.7E-02 0.800 1.000 1 2012 2012
dbSNP: rs948426
rs948426
LINC01387 ; LOC105371972
1 1.000 0.040 18 6567183 intron variant A/G snv 0.30 0.800 1.000 1 2012 2012
dbSNP: rs10759944
rs10759944
PTCSC2
3 0.925 0.080 9 97794690 intron variant A/G snv 0.72 0.710 1.000 2 2011 2014
dbSNP: rs965513
rs965513
PTCSC2
4 0.742 0.200 9 97793827 intron variant A/G;T snv 0.700 1.000 2 2011 2012
dbSNP: rs1064191
rs1064191 		1 1.000 0.040 6 31107598 downstream gene variant T/A;C snv 0.700 1.000 1 2012 2012
dbSNP: rs10984103
rs10984103 		2 0.925 0.080 9 97876993 TF binding site variant A/C snv 0.68 0.700 1.000 1 2012 2012
dbSNP: rs11065987
rs11065987 		12 0.807 0.280 12 111634620 intergenic variant A/G snv 0.29 0.700 1.000 1 2012 2012
dbSNP: rs11066188
rs11066188
HECTD4
4 0.851 0.320 12 112172910 intron variant G/A;C snv 0.30; 4.1E-06 0.700 1.000 1 2012 2012
dbSNP: rs11066320
rs11066320
PTPN11
4 0.925 0.120 12 112468611 intron variant A/G snv 0.70 0.700 1.000 1 2012 2012
dbSNP: rs1443438
rs1443438
PTCSC2
3 0.827 0.080 9 97787746 intron variant T/A;C snv 0.700 1.000 1 2012 2012
dbSNP: rs17019823
rs17019823
VAV3
1 1.000 0.040 1 107727331 intron variant A/C snv 9.6E-02 0.700 1.000 1 2012 2012
dbSNP: rs17020088
rs17020088
VAV3
1 1.000 0.040 1 107809190 intron variant T/C snv 0.15 0.700 1.000 1 2012 2012
dbSNP: rs17696736
rs17696736
NAA25
11 0.827 0.240 12 112049014 intron variant A/G snv 0.30 0.700 1.000 1 2012 2012
dbSNP: rs1877432
rs1877432
PTCSC2
1 1.000 0.040 9 97781598 intron variant G/A snv 0.36 0.700 1.000 1 2012 2012
dbSNP: rs2249876
rs2249876 		1 1.000 0.040 6 31080610 upstream gene variant G/A snv 0.45 0.700 1.000 1 2012 2012
dbSNP: rs2516049
rs2516049
HLA-DRB1
9 0.742 0.400 6 32602623 intergenic variant T/C snv 0.27 0.700 1.000 1 2012 2012
dbSNP: rs2517452
rs2517452 		1 1.000 0.040 6 31092385 intergenic variant T/C snv 0.53 0.700 1.000 1 2012 2012