Source: GWASCAT ×
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs12069782
rs12069782
C1orf141
2 1.000 0.040 1 67134418 intron variant C/T snv 0.82 0.700 1.000 1 2015 2015
dbSNP: rs1265757
rs1265757
TSBP1 ; TSBP1-AS1
1 1.000 0.040 6 32334605 intron variant C/T snv 6.4E-02 0.700 1.000 1 2016 2016
dbSNP: rs1480380
rs1480380
HLA-DMB
7 0.763 0.360 6 32945469 intron variant C/T snv 0.11 0.700 1.000 1 2016 2016
dbSNP: rs2187668
rs2187668
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
11 0.701 0.480 6 32638107 intron variant C/T snv 3.3E-03 0.700 1.000 1 2016 2016
dbSNP: rs223498
rs223498
MANBA
1 1.000 0.040 4 102730805 intron variant A/C snv 0.59 0.700 1.000 1 2015 2015
dbSNP: rs3117582
rs3117582
BAG6 ; APOM
3 0.716 0.440 6 31652743 intron variant T/G snv 7.1E-02 0.700 1.000 1 2016 2016
dbSNP: rs3130662
rs3130662
IER3
1 1.000 0.040 6 30746031 intron variant C/A snv 0.16 0.700 1.000 1 2016 2016
dbSNP: rs3135394
rs3135394
HLA-DRA
3 0.851 0.240 6 32440720 intron variant A/G snv 6.3E-02 0.700 1.000 1 2016 2016
dbSNP: rs4921492
rs4921492 		1 0.925 0.120 5 159405269 intron variant C/A;G snv 0.700 1.000 1 2015 2015
dbSNP: rs653178
rs653178
ATXN2
23 0.672 0.600 12 111569952 intron variant C/T snv 0.67 0.700 1.000 1 2015 2015
dbSNP: rs6748088
rs6748088
FAM117B
1 1.000 0.040 2 202691803 intron variant T/C snv 0.23 0.700 1.000 1 2015 2015
dbSNP: rs9257809
rs9257809
OR5V1 ; OR12D3
4 0.790 0.320 6 29388554 intron variant A/G snv 5.8E-02 0.700 1.000 1 2016 2016
dbSNP: rs10484399
rs10484399 		1 0.851 0.240 6 27566749 intergenic variant A/G snv 5.4E-02 0.700 1.000 1 2016 2016
dbSNP: rs1964995
rs1964995 		1 0.925 0.160 6 32481634 intergenic variant T/C snv 0.34 0.800 1.000 1 2012 2016
dbSNP: rs3130895
rs3130895 		1 1.000 0.040 6 28938014 intergenic variant G/A snv 5.2E-02 0.700 1.000 1 2016 2016
dbSNP: rs9275582
rs9275582 		1 0.925 0.160 6 32712293 regulatory region variant C/T snv 0.23 0.700 1.000 1 2016 2016
dbSNP: rs2076530
rs2076530
BTNL2 ; TSBP1-AS1
1 0.724 0.640 6 32396039 missense variant T/C snv 0.42 0.40 0.900 0.933 1 2005 2019
dbSNP: rs2233974
rs2233974
C6orf15
1 1.000 0.040 6 31112239 missense variant C/A;G snv 4.0E-06; 0.14 0.700 1.000 1 2016 2016
dbSNP: rs34536443
rs34536443
TYK2
20 0.667 0.400 19 10352442 missense variant G/C snv 2.7E-02 2.8E-02 0.700 1.000 1 2015 2015
dbSNP: rs13197574
rs13197574
ZNF165 ; ZSCAN12P1 ; ZSCAN16-AS1
2 0.925 0.080 6 28092461 non coding transcript exon variant T/C snv 5.2E-02 0.700 1.000 1 2016 2016
dbSNP: rs1633005
rs1633005
HLA-V
1 1.000 0.040 6 29796695 non coding transcript exon variant C/A;T snv 0.14 0.700 1.000 1 2016 2016
dbSNP: rs2524067
rs2524067
HLA-B ; USP8P1
1 1.000 0.040 6 31278044 non coding transcript exon variant A/G snv 0.13 0.700 1.000 1 2016 2016
dbSNP: rs2847260
rs2847260 		1 1.000 0.040 18 12775592 non coding transcript exon variant C/T snv 0.82 0.700 1.000 1 2015 2015
dbSNP: rs389884
rs389884
CYP21A2 ; DXO ; STK19
3 0.776 0.440 6 31973120 non coding transcript exon variant A/G snv 7.1E-02 0.700 1.000 1 2016 2016
dbSNP: rs886420
rs886420
GTF2H4
1 1.000 0.040 6 30911859 non coding transcript exon variant C/T snv 7.2E-02 0.700 1.000 1 2016 2016