Source: GWASCAT ×
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs479777
rs479777
CCDC88B ; LOC102723878
1 1.000 0.040 11 64340005 upstream gene variant T/C snv 0.27 0.810 1.000 1 2012 2012
dbSNP: rs1953600
rs1953600
ANXA11
1 1.000 0.040 10 80151969 3 prime UTR variant C/T snv 0.37 0.800 1.000 1 2008 2013
dbSNP: rs12069782
rs12069782
C1orf141
2 1.000 0.040 1 67134418 intron variant C/T snv 0.82 0.700 1.000 1 2015 2015
dbSNP: rs223498
rs223498
MANBA
1 1.000 0.040 4 102730805 intron variant A/C snv 0.59 0.700 1.000 1 2015 2015
dbSNP: rs2847260
rs2847260 		1 1.000 0.040 18 12775592 non coding transcript exon variant C/T snv 0.82 0.700 1.000 1 2015 2015
dbSNP: rs34536443
rs34536443
TYK2
20 0.667 0.400 19 10352442 missense variant G/C snv 2.7E-02 2.8E-02 0.700 1.000 1 2015 2015
dbSNP: rs4921492
rs4921492 		1 0.925 0.120 5 159405269 intron variant C/A;G snv 0.700 1.000 1 2015 2015
dbSNP: rs653178
rs653178
ATXN2
23 0.672 0.600 12 111569952 intron variant C/T snv 0.67 0.700 1.000 1 2015 2015
dbSNP: rs6748088
rs6748088
FAM117B
1 1.000 0.040 2 202691803 intron variant T/C snv 0.23 0.700 1.000 1 2015 2015
dbSNP: rs694739
rs694739
LOC102723878
6 0.763 0.320 11 64329761 upstream gene variant A/G snv 0.28 0.700 1.000 1 2015 2015
dbSNP: rs933957
rs933957
SP140
1 1.000 0.040 2 230313189 3 prime UTR variant T/C snv 0.20 0.700 1.000 1 2015 2015
dbSNP: rs10484399
rs10484399 		1 0.851 0.240 6 27566749 intergenic variant A/G snv 5.4E-02 0.700 1.000 1 2016 2016
dbSNP: rs11244
rs11244
HLA-DOB
1 0.925 0.160 6 32812947 3 prime UTR variant G/A snv 0.27 0.700 1.000 1 2016 2016
dbSNP: rs1233491
rs1233491 		2 0.925 0.080 6 29493953 upstream gene variant G/C snv 5.3E-02 0.700 1.000 1 2016 2016
dbSNP: rs1265757
rs1265757
TSBP1 ; TSBP1-AS1
1 1.000 0.040 6 32334605 intron variant C/T snv 6.4E-02 0.700 1.000 1 2016 2016
dbSNP: rs13197574
rs13197574
ZNF165 ; ZSCAN12P1 ; ZSCAN16-AS1
2 0.925 0.080 6 28092461 non coding transcript exon variant T/C snv 5.2E-02 0.700 1.000 1 2016 2016
dbSNP: rs13213152
rs13213152
ZSCAN12
1 1.000 0.040 6 28381921 3 prime UTR variant A/G snv 5.2E-02 0.700 1.000 1 2016 2016
dbSNP: rs1480380
rs1480380
HLA-DMB
7 0.763 0.360 6 32945469 intron variant C/T snv 0.11 0.700 1.000 1 2016 2016
dbSNP: rs1633005
rs1633005
HLA-V
1 1.000 0.040 6 29796695 non coding transcript exon variant C/A;T snv 0.14 0.700 1.000 1 2016 2016
dbSNP: rs1964995
rs1964995 		1 0.925 0.160 6 32481634 intergenic variant T/C snv 0.34 0.800 1.000 1 2012 2016
dbSNP: rs2187668
rs2187668
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
11 0.701 0.480 6 32638107 intron variant C/T snv 3.3E-03 0.700 1.000 1 2016 2016
dbSNP: rs2233974
rs2233974
C6orf15
1 1.000 0.040 6 31112239 missense variant C/A;G snv 4.0E-06; 0.14 0.700 1.000 1 2016 2016
dbSNP: rs2524067
rs2524067
HLA-B ; USP8P1
1 1.000 0.040 6 31278044 non coding transcript exon variant A/G snv 0.13 0.700 1.000 1 2016 2016
dbSNP: rs3117582
rs3117582
BAG6 ; APOM
3 0.716 0.440 6 31652743 intron variant T/G snv 7.1E-02 0.700 1.000 1 2016 2016
dbSNP: rs3129788
rs3129788 		1 1.000 0.040 6 29089862 upstream gene variant G/A snv 5.2E-02 0.700 1.000 1 2016 2016