Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1556620697
rs1556620697
G 0.700 GeneticVariation CLINVAR

dbSNP: rs1557055311
rs1557055311
C 0.700 GeneticVariation CLINVAR

dbSNP: rs1799822
rs1799822
0.010 GeneticVariation BEFREE A polymorphism of rs1799822 in the CPT2 gene is associated with the severity of EV71 encephalitis and may be one of the protection factors of severe EV71 encephalitis. 31201655

2019

dbSNP: rs34637584
rs34637584
0.010 GeneticVariation BEFREE Mouse pups with reovirus-induced encephalitis that expressed the p.G2019S Lrrk2 mutation showed increased mortality despite lower viral titers. 31554740

2019

dbSNP: rs1889570
rs1889570
0.010 GeneticVariation BEFREE Severe cases and cases with EV71 encephalitis had a significantly higher frequency of the rs1889570 T/T genotype and T allele. 29549443

2018

dbSNP: rs2858870
rs2858870
0.010 GeneticVariation BEFREE Anti-LGI1 encephalitis was highly associated with 27 single-nucleotide polymorphisms (SNPs) in the HLA-II region (leading SNP rs2858870 p = 1.22 × 10<sup>-17</sup> , OR = 13.66 [7.50-24.87]). 29572931

2018

dbSNP: rs739901
rs739901
0.010 GeneticVariation BEFREE In EV71-infected patients, the CA genotype distribution (P=0.007), A allele frequency (OR 1.32,95% CI 1.0-1.7, P=0.034) and CA+AA carriage frequency (P=0.003) of OAS2 rs739901 5'-flanking were obviously elevated as compared with controls, but there were no statistically significant differences between mild cases and encephalitis cases. 30128873

2018

dbSNP: rs1800871
rs1800871
0.010 GeneticVariation BEFREE RESULTS IL-4 rs2227283 and IL-10 rs1800871 have no correlation in with risk of virus-induced encephalitis (both P>0.05) GA and AA genotypes were related to IL-4 rs2227288 and GT, while TT and GT + TT genotypes were related to IL-10 rs1800872. 28935853

2017

dbSNP: rs1800872
rs1800872
0.010 GeneticVariation BEFREE Through use of direct sequencing, we showed that genotypes of IL-4 rs2227288 and IL-10 rs1800872 may have particular host susceptibility to virus-induced encephalitis. 28935853

2017

dbSNP: rs2227283
rs2227283
0.010 GeneticVariation BEFREE RESULTS IL-4 rs2227283 and IL-10 rs1800871 have no correlation in with risk of virus-induced encephalitis (both P>0.05) GA and AA genotypes were related to IL-4 rs2227288 and GT, while TT and GT + TT genotypes were related to IL-10 rs1800872. 28935853

2017

dbSNP: rs2227288
rs2227288
0.010 GeneticVariation BEFREE Through use of direct sequencing, we showed that genotypes of IL-4 rs2227288 and IL-10 rs1800872 may have particular host susceptibility to virus-induced encephalitis. 28935853

2017

dbSNP: rs35311343
rs35311343
0.010 GeneticVariation BEFREE We detected 2 rare missense mutations in TLR3: 1 in a patient with HSE (p.Leu297Val) and 1 in a patient with varicella-zoster virus encephalitis (p.Leu199Phe). 28368532

2017

dbSNP: rs753482575
rs753482575
0.010 GeneticVariation BEFREE We detected 2 rare missense mutations in TLR3: 1 in a patient with HSE (p.Leu297Val) and 1 in a patient with varicella-zoster virus encephalitis (p.Leu199Phe). 28368532

2017

dbSNP: rs1799821
rs1799821
0.010 GeneticVariation BEFREE rs2229291 and rs1799821 variants in CPT II gene might be 1 of the predisposing factors of acute encephalitis. 25361188

2014

dbSNP: rs2229291
rs2229291
0.010 GeneticVariation BEFREE rs2229291 and rs1799821 variants in CPT II gene might be 1 of the predisposing factors of acute encephalitis. 25361188

2014

dbSNP: rs763780
rs763780
0.010 GeneticVariation BEFREE We investigated the association between EV71 encephalitis and of IL-17F 7488T/C (rs763780) gene polymorphism, which is known to cause a His-to-Arg substitution at amino acid 161. 23519962

2013

dbSNP: rs1010930015
rs1010930015
0.010 GeneticVariation BEFREE We describe here two unrelated children with HSE carrying different heterozygous mutations (D50A and G159A) in TBK1, the gene encoding TANK-binding kinase 1, a kinase at the crossroads of multiple IFN-inducing signaling pathways. 22851595

2012

dbSNP: rs1555202947
rs1555202947
0.010 GeneticVariation BEFREE We describe here two unrelated children with HSE carrying different heterozygous mutations (D50A and G159A) in TBK1, the gene encoding TANK-binding kinase 1, a kinase at the crossroads of multiple IFN-inducing signaling pathways. 22851595

2012