Source: ALL
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs12203592
rs12203592
IRF4
0.800 GeneticVariation GWASCAT Multitrait genome association analysis identifies new susceptibility genes for human anthropometric variation in the GCAT cohort. 30166351

2018
dbSNP: rs1408799
rs1408799 		0.800 GeneticVariation GWASCAT Multitrait genome association analysis identifies new susceptibility genes for human anthropometric variation in the GCAT cohort. 30166351

2018
dbSNP: rs1667394
rs1667394
HERC2
0.800 GeneticVariation GWASCAT Multitrait genome association analysis identifies new susceptibility genes for human anthropometric variation in the GCAT cohort. 30166351

2018
dbSNP: rs16891982
rs16891982
SLC45A2
0.800 GeneticVariation GWASCAT Multitrait genome association analysis identifies new susceptibility genes for human anthropometric variation in the GCAT cohort. 30166351

2018
dbSNP: rs12520016
rs12520016
LOC102724943 ; LINC02236
G 0.800 GeneticVariation GWASDB Genome-wide association studies identify several new loci associated with pigmentation traits and skin cancer risk in European Americans. 23548203

2013
dbSNP: rs12520016
rs12520016
LOC102724943 ; LINC02236
G 0.800 GeneticVariation GWASCAT Genome-wide association studies identify several new loci associated with pigmentation traits and skin cancer risk in European Americans. 23548203

2013
dbSNP: rs12896399
rs12896399
LOC105370627
G 0.800 GeneticVariation GWASDB Genome-wide association studies identify several new loci associated with pigmentation traits and skin cancer risk in European Americans. 23548203

2013
dbSNP: rs12896399
rs12896399
LOC105370627
G 0.800 GeneticVariation GWASCAT Genome-wide association studies identify several new loci associated with pigmentation traits and skin cancer risk in European Americans. 23548203

2013
dbSNP: rs12913832
rs12913832
HERC2
A 0.800 GeneticVariation GWASCAT Additionally, we identified a significant interaction between the SNPs rs7173419 and rs12913832 in the OCA2 gene region on brown eye color (P-value for interaction = 3.8 × 10(-3)). 23548203

2013
dbSNP: rs12913832
rs12913832
HERC2
A 0.800 GeneticVariation GWASDB Additionally, we identified a significant interaction between the SNPs rs7173419 and rs12913832 in the OCA2 gene region on brown eye color (P-value for interaction = 3.8 × 10(-3)). 23548203

2013
dbSNP: rs12913832
rs12913832
HERC2
G 0.800 GeneticVariation GWASDB Additionally, we identified a significant interaction between the SNPs rs7173419 and rs12913832 in the OCA2 gene region on brown eye color (P-value for interaction = 3.8 × 10(-3)). 23548203

2013
dbSNP: rs12913832
rs12913832
HERC2
0.800 GeneticVariation GWASDB Genetics of eye colours in different rural populations on the Silk Road. 23486544

2013
dbSNP: rs12913832
rs12913832
HERC2
G 0.800 GeneticVariation GWASCAT Additionally, we identified a significant interaction between the SNPs rs7173419 and rs12913832 in the OCA2 gene region on brown eye color (P-value for interaction = 3.8 × 10(-3)). 23548203

2013
dbSNP: rs1408799
rs1408799 		C 0.800 GeneticVariation GWASCAT Genome-wide association studies identify several new loci associated with pigmentation traits and skin cancer risk in European Americans. 23548203

2013
dbSNP: rs1408799
rs1408799 		C 0.800 GeneticVariation GWASDB Genome-wide association studies identify several new loci associated with pigmentation traits and skin cancer risk in European Americans. 23548203

2013
dbSNP: rs1667394
rs1667394
HERC2
0.800 GeneticVariation GWASDB Genetics of eye colours in different rural populations on the Silk Road. 23486544

2013
dbSNP: rs3002288
rs3002288
VASH2
A 0.800 GeneticVariation GWASCAT Using blue, intermediate (including green) and brown eye colors as co-dominant outcomes, we identified the SNP rs3002288 in VASH2 on 1q32.3 associated with brown eye (P = 7.0 × 10(-8); P = 5.3 × 10(-5) in the discovery set and P = 0.02 in the replication set). 23548203

2013
dbSNP: rs3002288
rs3002288
VASH2
A 0.800 GeneticVariation GWASDB Using blue, intermediate (including green) and brown eye colors as co-dominant outcomes, we identified the SNP rs3002288 in VASH2 on 1q32.3 associated with brown eye (P = 7.0 × 10(-8); P = 5.3 × 10(-5) in the discovery set and P = 0.02 in the replication set). 23548203

2013
dbSNP: rs7173419
rs7173419
OCA2
T 0.800 GeneticVariation GWASDB Additionally, we identified a significant interaction between the SNPs rs7173419 and rs12913832 in the OCA2 gene region on brown eye color (P-value for interaction = 3.8 × 10(-3)). 23548203

2013
dbSNP: rs7173419
rs7173419
OCA2
T 0.800 GeneticVariation GWASCAT Additionally, we identified a significant interaction between the SNPs rs7173419 and rs12913832 in the OCA2 gene region on brown eye color (P-value for interaction = 3.8 × 10(-3)). 23548203

2013
dbSNP: rs916977
rs916977
HERC2
0.800 GeneticVariation GWASDB Genetics of eye colours in different rural populations on the Silk Road. 23486544

2013
dbSNP: rs1667394
rs1667394
HERC2
C 0.800 GeneticVariation GWASDB In our two-stage association study, we reproduce the association of rs1667394 at the OCA2/HERC2 locus with eye color but we do not identify new genetic determinants of skin and hair pigmentation supporting the lack of major genes affecting skin and hair color variation within Europe and suggesting that not only careful phenotyping but also larger cohorts are required to understand the genetic architecture of these complex quantitative traits. 23118974

2012
dbSNP: rs1667394
rs1667394
HERC2
C 0.800 GeneticVariation GWASCAT In our two-stage association study, we reproduce the association of rs1667394 at the OCA2/HERC2 locus with eye color but we do not identify new genetic determinants of skin and hair pigmentation supporting the lack of major genes affecting skin and hair color variation within Europe and suggesting that not only careful phenotyping but also larger cohorts are required to understand the genetic architecture of these complex quantitative traits. 23118974

2012
dbSNP: rs288139
rs288139
FBXL17
A 0.800 GeneticVariation GWASDB Genome-wide association studies of quantitatively measured skin, hair, and eye pigmentation in four European populations. 23118974

2012
dbSNP: rs288139
rs288139
FBXL17
A 0.800 GeneticVariation GWASCAT Genome-wide association studies of quantitatively measured skin, hair, and eye pigmentation in four European populations. 23118974

2012