Source: BEFREE ×
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1860661
rs1860661
0.810 GeneticVariation BEFREE We identify a novel variant at 19p13.3 associated with HL (rs1860661; odds ratio (OR)=0.81, 95% confidence interval (95% CI) = 0.76-0.86, P(combined) = 3.5 × 10(-10)), located in intron 2 of TCF3 (also known as E2A), a regulator of B- and T-cell lineage commitment known to be involved in HL pathogenesis. 24920014

2014

dbSNP: rs20541
rs20541
0.810 GeneticVariation BEFREE We searched for an association between the interleukin 4 receptor gene (IL4R) rs1805015 and interleukin 13 gene (IL13) rs20541 polymorphisms and the development of antibodies to hepatitis B surface antigen (anti-HBs) in the case of hepatitis B virus (HBV) vaccination or infection in hemodialysis (HD) patients. 23462527

2013

dbSNP: rs649775
rs649775
0.710 GeneticVariation BEFREE We identify 5 new HL risk loci at 6p21.31 (rs649775; <i>P</i> = 2.11 × 10<sup>-10</sup>), 6q23.3 (rs1002658; <i>P</i> = 2.97 × 10<sup>-8</sup>), 11q23.1 (rs7111520; <i>P</i> = 1.44 × 10<sup>-11</sup>), 16p11.2 (rs6565176; <i>P</i> = 4.00 × 10<sup>-8</sup>), and 20q13.12 (rs2425752; <i>P</i> = 2.01 × 10<sup>-8</sup>). 30194254

2018

dbSNP: rs3212227
rs3212227
0.030 GeneticVariation BEFREE 3' untranslated region A>C (rs3212227) polymorphism of Interleukin 12B gene as a potential risk factor for Hodgkin's lymphoma in Brazilian children and adolescents. 31277552

2019

dbSNP: rs568408
rs568408
0.030 GeneticVariation BEFREE Polymorphisms of IFNL3 rs8099917 and IL12A rs568408 contribute to survival of HD patients, but not as independent factors. 28525983

2017

dbSNP: rs3212227
rs3212227
0.030 GeneticVariation BEFREE The IL-12A rs568408 and IL-12B rs3212227 polymorphisms were analyzed in relation to anti-HBs development in 602 HD patients with negative antibodies to HBV core antigen (anti-HBc) who were hepatitis B vaccinated (group I) as well as in 237 anti-HBc positive HD patients who were infected with HBV in the past (group II). 24158609

2013

dbSNP: rs568408
rs568408
0.030 GeneticVariation BEFREE The IL-12A rs568408 and IL-12B rs3212227 polymorphisms were analyzed in relation to anti-HBs development in 602 HD patients with negative antibodies to HBV core antigen (anti-HBc) who were hepatitis B vaccinated (group I) as well as in 237 anti-HBc positive HD patients who were infected with HBV in the past (group II). 24158609

2013

dbSNP: rs3212227
rs3212227
0.030 GeneticVariation BEFREE In the logistic regression analysis, the higher frequency of rs360719 CC individually (2.9% in 207 patients without anti-HBs development vs 8.0% in 311 patients with anti-HBs development, p = 0.009) and of rs360719 CC combined with rs568408 GG (p = 0.048), rs568408 GA (p = 0.035), rs568408 GG/AA (p = 0.034) or rs3212227 AA (p = 0.046) was associated with an increased chance for the development of anti-HBs in HD patients. 22863216

2012

dbSNP: rs568408
rs568408
0.030 GeneticVariation BEFREE In the logistic regression analysis, the higher frequency of rs360719 CC individually (2.9% in 207 patients without anti-HBs development vs 8.0% in 311 patients with anti-HBs development, p = 0.009) and of rs360719 CC combined with rs568408 GG (p = 0.048), rs568408 GA (p = 0.035), rs568408 GG/AA (p = 0.034) or rs3212227 AA (p = 0.046) was associated with an increased chance for the development of anti-HBs in HD patients. 22863216

2012

dbSNP: rs12917
rs12917
0.020 GeneticVariation BEFREE Recently, we detected the single nucleotide polymorphism (SNP) rs12917 (C/T) in the MGMT sequence adjacent to the active site in Hodgkin lymphoma (HL) cell line KM-H2. 30945122

2019

dbSNP: rs1801725
rs1801725
0.020 GeneticVariation BEFREE CASR polymorphisms (rs7652589, rs1801725) are associated with dyslipidemia in HD patients. 31775661

2019

dbSNP: rs7652589
rs7652589
0.020 GeneticVariation BEFREE CASR polymorphisms (rs7652589, rs1801725) are associated with dyslipidemia in HD patients. 31775661

2019

dbSNP: rs1800795
rs1800795
0.020 GeneticVariation BEFREE Subgroup analysis indicated that rs1800795 was significantly associated with increased risk of cervical cancer, colorectal cancer, breast cancer, prostate cancer, lung cancer, glioma, non-Hodgkin's lymphoma and Hodgkin's lymphoma but not gastric cancer and multiple myeloma. 29552316

2018

dbSNP: rs1801725
rs1801725
0.020 GeneticVariation BEFREE Homozygosity of the rs1801725 variant allele contributes to infection-related mortality in HD patients. 29763933

2018

dbSNP: rs8099917
rs8099917
0.020 GeneticVariation BEFREE The IFNL4 rs8099917 T allele and anti-HBs development in response to HBV vaccine are associated with better survival in hemodialysis (HD) patients. 30259815

2018

dbSNP: rs12917
rs12917
0.020 GeneticVariation BEFREE Results indicated the presence of all the rs2308321 (I143 V), rs2308327 (K178R) and rs12917 (L84F) MGMT-variants, which were previously associated with temozolomide myelotoxicity. rs12917 (L84F) variant was reported as associating with lesser risk of gallbladder tumours, yet with higher risk of non-Hodgkin lymphomas related with exposure to chlorinated solvents or hair dyes. 28436299

2017

dbSNP: rs8099917
rs8099917
0.020 GeneticVariation BEFREE Polymorphisms of IFNL3 rs8099917 and IL12A rs568408 contribute to survival of HD patients, but not as independent factors. 28525983

2017

dbSNP: rs7652589
rs7652589
0.020 GeneticVariation BEFREE We aimed to determine the associations of rs7652589 with nephrolithiasis-related ESRD, Ca, P, ALP, PTH, response to treatment with cinacalcet, prevalence of coronary artery disease, and all-cause/cardiovascular mortality in HD patients (n = 1162). 27739473

2016

dbSNP: rs1800795
rs1800795
0.020 GeneticVariation BEFREE The IL-6 promoter rs1800795 and rs1800797 were not associated with overall susceptibility to non-Hodgkin's lymphomas. 24059848

2013

dbSNP: rs1042522
rs1042522
0.020 GeneticVariation BEFREE This meta-analysis indicates that the p53 Arg72Pro polymorphism may contribute to susceptibility to non-Hodgkin lymphomas. 23029260

2012

dbSNP: rs1131691014
rs1131691014
0.020 GeneticVariation BEFREE This meta-analysis indicates that the p53 Arg72Pro polymorphism may contribute to susceptibility to non-Hodgkin lymphomas. 23029260

2012

dbSNP: rs1695
rs1695
0.020 GeneticVariation BEFREE The GSTP1 rs1695 A-allele reduced the risk for HL (GG vs. AG, OR 0.64 [0.42-0.99], p = 0.04; GG vs. AG/AA combined genotypes, OR 0.70 [0.47-1.04], p = 0.07), and the GSTT1 deleted genotype increased the risk for HL (OR 3.17 [1.97-5.09], p < 0.001) regardless of age. 22475179

2012

dbSNP: rs878854066
rs878854066
0.020 GeneticVariation BEFREE This meta-analysis indicates that the p53 Arg72Pro polymorphism may contribute to susceptibility to non-Hodgkin lymphomas. 23029260

2012

dbSNP: rs1042522
rs1042522
0.020 GeneticVariation BEFREE We found no association of R72P with the risk of NHL and HL development [OR(ArgPro/ProPro)=0.9 (95% CI 0.7-1.2) and 1.2 (95% CI 0.9-1.5), respectively] or with survival. 21546086

2011

dbSNP: rs1131691014
rs1131691014
0.020 GeneticVariation BEFREE We found no association of R72P with the risk of NHL and HL development [OR(ArgPro/ProPro)=0.9 (95% CI 0.7-1.2) and 1.2 (95% CI 0.9-1.5), respectively] or with survival. 21546086

2011