Source: BEFREE ×
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1057519837
rs1057519837
0.710 GeneticVariation BEFREE Of interest, mutation analyses revealed the presence of an identical point mutation, c.98C>G, in exon 3 of β-catenin (CTNNB1) in both tumors. 21881488

2011

dbSNP: rs121913412
rs121913412
0.070 GeneticVariation BEFREE Additional adjustment for tumor size yielded a P-value of 0.082 with hazard ratio's of 0.83 [95% confidence interval (CI) 0.48-1.42), 0.37 (95% CI 0.12-1.14), and 0.44 (95% CI 0.21-0.92) for T41A, S45P and WT DTF tumors compared to S45F DTF tumors. 31804402

2019

dbSNP: rs121913412
rs121913412
0.070 GeneticVariation BEFREE Furthermore, analysis of beta-catenin gene revealed that the tumor had a typical missense mutation of threonine to alanine at colon 41 (T41A) in exon 3. 26907785

2016

dbSNP: rs121913412
rs121913412
0.070 GeneticVariation BEFREE The tumor carried a heterozygous p.T41A mutation in CTNNB1. 27213811

2016

dbSNP: rs121913412
rs121913412
0.070 GeneticVariation BEFREE Tumor DNA analysis revealed a heterozygous ACC-to-GCC missense mutation in codon 41 (T41A) and a TCT-to-CCT missense mutation in codon 45 (S45P) of exon 3 of the beta-catenin gene that was confirmed at the cDNA level. 18419788

2008

dbSNP: rs121913412
rs121913412
0.070 GeneticVariation BEFREE Molecular analysis of microdissected cells from the left tumour revealed the same S45P CTNNB1 mutation in blastema, tubuli, stroma and muscle, and a different CTNNB1 mutation (T41A) in stromal cells isolated from another area of the same slide. 17551084

2007

dbSNP: rs121913412
rs121913412
0.070 GeneticVariation BEFREE Five carcinomas showed beta-catenin mutations (S37C, T41I, T41A), including 4 (33%) of 12 endometrioid-type tumors and 1 (14%) of 7 mucinous-type tumors. 10391090

1999

dbSNP: rs121913412
rs121913412
0.070 GeneticVariation BEFREE Heterozygous substitution mutations at codon 37 in two cases (S37F and S37C) and at codon 41 in one case (T41A) were found in three endometrioid lesions (one borderline tumor and two carcinomas) with abnormal beta-catenin expression. 9537226

1998

dbSNP: rs121913407
rs121913407
0.050 GeneticVariation BEFREE Additional adjustment for tumor size yielded a P-value of 0.082 with hazard ratio's of 0.83 [95% confidence interval (CI) 0.48-1.42), 0.37 (95% CI 0.12-1.14), and 0.44 (95% CI 0.21-0.92) for T41A, S45P and WT DTF tumors compared to S45F DTF tumors. 31804402

2019

dbSNP: rs121913409
rs121913409
0.050 GeneticVariation BEFREE Finally, using a previously reported 16-gene signature, it was shown that YAP1-ΔN90-β-catenin HB tumors exhibited genetic similarities with more proliferative, less differentiated, GS-negative HB patient tumors, whereas YAP1-S33Y/S45Y-β-catenin HB exhibited heterogeneity and clustered with both well-differentiated GS-positive and proliferative GS-negative patient tumors. 30794807

2019

dbSNP: rs121913409
rs121913409
0.050 GeneticVariation BEFREE Additional adjustment for tumor size yielded a P-value of 0.082 with hazard ratio's of 0.83 [95% confidence interval (CI) 0.48-1.42), 0.37 (95% CI 0.12-1.14), and 0.44 (95% CI 0.21-0.92) for T41A, S45P and WT DTF tumors compared to S45F DTF tumors. 31804402

2019

dbSNP: rs121913409
rs121913409
0.050 GeneticVariation BEFREE This study examines whether the different CTNNB1 mutants (T41A, S45F) occurring in DTF tumors differentially affect Wnt signaling activity, which might explain the different disease course between DTF patients harboring different CTNNB1 mutations. 30528042

2019

dbSNP: rs121913409
rs121913409
0.050 GeneticVariation BEFREE Four APAs showed a predominant (≥50%) zona fasciculata-like cell pattern: one tumor had CYP11B1 H-score = 150, no detectable CYP11B2 expression, and harbored a PRKACA p.Leu206Arg mutation (that we have reported previously elsewhere), one had no CYP11B1 expression, CYP11B2 H-score = 40, and no mutations; the remaining two adenomas had high CYP11B1 H-score (160 and 240, respectively) and low CYP11B2 H-score (30 and 15, respectively), with the latter harboring a CTNNB1 p.Ser45Phe activating mutation. 28405879

2017

dbSNP: rs121913407
rs121913407
0.050 GeneticVariation BEFREE Tumor DNA analysis revealed a heterozygous ACC-to-GCC missense mutation in codon 41 (T41A) and a TCT-to-CCT missense mutation in codon 45 (S45P) of exon 3 of the beta-catenin gene that was confirmed at the cDNA level. 18419788

2008

dbSNP: rs121913407
rs121913407
0.050 GeneticVariation BEFREE Molecular analysis of microdissected cells from the left tumour revealed the same S45P CTNNB1 mutation in blastema, tubuli, stroma and muscle, and a different CTNNB1 mutation (T41A) in stromal cells isolated from another area of the same slide. 17551084

2007

dbSNP: rs121913407
rs121913407
0.050 GeneticVariation BEFREE Other three mutations were detected in three of five multiple tumors developed in the bilateral WT patient; a mutation of Delta45 in one of two tumors in the right kidney, and Ser45Cys (TCT --> TGT) and Ser45Pro (TCT --> CCT) in two of three tumors in the left kidney. 12239584

2002

dbSNP: rs121913409
rs121913409
0.050 GeneticVariation BEFREE Other three mutations were detected in three of five multiple tumors developed in the bilateral WT patient; a mutation of Delta45 in one of two tumors in the right kidney, and Ser45Cys (TCT --> TGT) and Ser45Pro (TCT --> CCT) in two of three tumors in the left kidney. 12239584

2002

dbSNP: rs121913407
rs121913407
0.050 GeneticVariation BEFREE Nuclear and/or cytoplasmic localization of beta-catenin, a potential indicator of wnt pathway activation, was seen focally within roughly one third of the tumors, though a clonal somatic mutation in beta-catenin was found in only one case (codon 45 Ser-->Pro). 10027390

1999

dbSNP: rs121913400
rs121913400
0.030 GeneticVariation BEFREE Because heterogeneity in downstream signaling is being identified owing to mutational differences even in the β-catenin gene alone, we investigated if co-expression of point mutants of β-catenin (S33Y or S45Y) with S127A-YAP1 led to similar tumors as YAP1-ΔN90-β-catenin. 30794807

2019

dbSNP: rs121913400
rs121913400
0.030 GeneticVariation BEFREE In further support for the driving role of β-catenin during hepatocarcinogenesis, improved colony growth in soft agar and accelerated tumor formation was also confirmed in Huh7 cells following stable expression of the constitutively active S33Y β-catenin mutant. 21807967

2011

dbSNP: rs121913400
rs121913400
0.030 GeneticVariation BEFREE Of interest, mutation analyses revealed the presence of an identical point mutation, c.98C>G, in exon 3 of β-catenin (CTNNB1) in both tumors. 21881488

2011

dbSNP: rs1233296947
rs1233296947
0.010 GeneticVariation BEFREE Inhibition of glucosylceramide synthase with d-threo-1-phenyl-2-decanoylamino-3-morpholino-1-propanol (PDMP) sensitized p53-R273H cancer cells and tumor xenografts to doxorubicin treatments. 27517620

2016

dbSNP: rs3864004
rs3864004
0.010 GeneticVariation BEFREE In multivariate Cox regression analysis, absence of CTNNB1 haplotype A-A at rs3864004 and rs4135385 positions and advanced tumor stage were independent poor predictors of patient survival in patients with HCC. 26968103

2016

dbSNP: rs4135385
rs4135385
0.010 GeneticVariation BEFREE In multivariate Cox regression analysis, absence of CTNNB1 haplotype A-A at rs3864004 and rs4135385 positions and advanced tumor stage were independent poor predictors of patient survival in patients with HCC. 26968103

2016

dbSNP: rs121913413
rs121913413
0.010 GeneticVariation BEFREE Five carcinomas showed beta-catenin mutations (S37C, T41I, T41A), including 4 (33%) of 12 endometrioid-type tumors and 1 (14%) of 7 mucinous-type tumors. 10391090

1999