Source: BEFREE ×
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1799782
rs1799782
0.050 GeneticVariation BEFREE However, subgroup analysis by ethnicities demonstrated that Gln/Arg genotype of Arg399Gln polymorphism was associated with increased risk of NMSC under the heterogeneous model in Asian populations (Gln/Arg vs Arg/Arg: OR =1.39, 95% CI =1.04-1.87, <i>P</i>=0.03); subgroup analysis by tumor types showed that Trp/Trp genotype of Arg194Trp was positively associated with decreased cancer risk in squamous-cell skin cancer (SCC) type under the homogeneous model (Trp/Trp vs Arg/Arg: OR =0.38, 95% CI =0.16-0.92, <i>P</i>=0.03). 28761356

2017

dbSNP: rs25487
rs25487
0.050 GeneticVariation BEFREE ERCC1 Lys259Thr (rs735482), ERCC2 Lys751Gln (rs13181), ERCC5 His46His C>T (rs1047768), XRCC1 Arg399Gln (rs25487), TP53 Arg72Pro (rs1042522) and MDM2 309T>G (rs2279744) were analyzed on tumor DNA. 28351583

2017

dbSNP: rs25487
rs25487
0.050 GeneticVariation BEFREE However, subgroup analysis by ethnicities demonstrated that Gln/Arg genotype of Arg399Gln polymorphism was associated with increased risk of NMSC under the heterogeneous model in Asian populations (Gln/Arg vs Arg/Arg: OR =1.39, 95% CI =1.04-1.87, <i>P</i>=0.03); subgroup analysis by tumor types showed that Trp/Trp genotype of Arg194Trp was positively associated with decreased cancer risk in squamous-cell skin cancer (SCC) type under the homogeneous model (Trp/Trp vs Arg/Arg: OR =0.38, 95% CI =0.16-0.92, <i>P</i>=0.03). 28761356

2017

dbSNP: rs25487
rs25487
0.050 GeneticVariation BEFREE Stratified analyses revealed that A/A + G/A genotypes of XRCC1 rs25487 are associated with significantly reduced risk of death compared with the G/G genotype in patients grouped by tumor size, portal vein tumor thrombus (PVTT), alpha-fetoprotein (AFP) and TNM stage (all p < 0.05). 26918371

2016

dbSNP: rs1799782
rs1799782
0.050 GeneticVariation BEFREE Subgroup analyses according to ethnicity, tumor site, publication year, genotyping method also detected no significant association in any subgroup, except that oral cancer was associated with Arg194Trp variant in recessive model. 24086310

2013

dbSNP: rs25487
rs25487
0.050 GeneticVariation BEFREE ERCC1 (C8092A, C118T), XPD (Lys751Gln), XRCC1 (Arg399Gln) and XRCC3 (Thr241Met) gene polymorphisms were evaluated on tumour DNA by TaqMan allelic discrimination assay. 23549037

2013

dbSNP: rs25487
rs25487
0.050 GeneticVariation BEFREE The results show strong evidence that the variant (C) allele confers significant increased risk in the Chinese (OR 1.20-1.44, P < 0.0001-0.002), exacerbated by smoking (OR 1.66-2.53, P < 0.0001) and joint interaction with XRCC1 Arg399Gln (OR 1.39, P < 0.0001) as well as adjustment for tumor type (gastric carcinoma ORs 1.39-2.01, P < 0.0001). 23073772

2012

dbSNP: rs1799782
rs1799782
0.050 GeneticVariation BEFREE No significant association was observed in stratified analyses of Arg399Gln and Arg194Trp polymorphisms by tumor type, race, or control source. 22110224

2011

dbSNP: rs1799782
rs1799782
0.050 GeneticVariation BEFREE The XRCC1 R194W polymorphism was associated with a modest increased risk of TP53 tumor mutations in those who regularly smoked cigarettes (odds ratio, 1.4; 95% confidence interval, 1.02-1.9). 19959686

2009

dbSNP: rs1799782
rs1799782
0.050 GeneticVariation BEFREE Our meta-analysis on total of 11,957 cancer cases and 14,174 control subjects from 38 published case-control studies showed that the odds ratio (OR) for the variant genotypes (Trp/Trp + Arg/Trp) of the Arg194Trp polymorphism, compared with the wild-type homozygote (Arg/Arg), was 0.89 [95% confidence interval (95% CI), 0.81-0.98] for all tumor types without between-study heterogeneity. 16030121

2005

dbSNP: rs3213245
rs3213245
0.010 GeneticVariation BEFREE OS patients carrying TC genotype and C allele at rs3213245 were more likely to be with larger tumor size and metastasis. 30464596

2018

dbSNP: rs25489
rs25489
0.010 GeneticVariation BEFREE We found that the wide genotype GG of X-ray repair cross-complementing 1 (<i>XRCC1</i>) rs25489 (GG vs GA: OR=3.833, 95%CI=1.512-9.714, <i>P</i>=0.005; GG vs GA+AA: OR=3.610, 95%CI=1.496-8.713, <i>P</i>=0.004) and the wide genotype CC of 8-oxoguanine DNA glycosylase (<i>OGG1</i>) rs1052133 (CC vs GG: OR=0.263, 95%CI=0.073-0.951, <i>P</i>=0.042; CC vs CG+GG: OR=0.454, 95%CI=0.195-1.053, <i>P</i>=0.066) were positively and negatively associated with primary tumor efficacy at the end of radiotherapy, respectively. 29108254

2017

dbSNP: rs377566281
rs377566281
0.010 GeneticVariation BEFREE In addition to tumour stage, which is an important prognostic factor affecting to the survival of stomach cancer patients, the genetic variant Gln339Arg in XRCC1 may non-significantly contribute to risk of stomach cancer death among Thai people. 26320504

2015