Source: GWASCAT ×
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs13405728
rs13405728
LHCGR ; STON1-GTF2A1L
A 0.900 GeneticVariation GWASCAT We identified strong evidence of associations between PCOS and three loci: 2p16.3 (rs13405728; combined P-value by meta-analysis P(meta) = 7.55 × 10⁻²¹, odds ratio (OR) 0.71); 2p21 (rs13429458, P(meta) = 1.73 × 10⁻²³, OR 0.67); and 9q33.3 (rs2479106, P(meta) = 8.12 × 10⁻¹⁹, OR 1.34). 21151128

2011
dbSNP: rs2479106
rs2479106
DENND1A
G 0.900 GeneticVariation GWASCAT We identified strong evidence of associations between PCOS and three loci: 2p16.3 (rs13405728; combined P-value by meta-analysis P(meta) = 7.55 × 10⁻²¹, odds ratio (OR) 0.71); 2p21 (rs13429458, P(meta) = 1.73 × 10⁻²³, OR 0.67); and 9q33.3 (rs2479106, P(meta) = 8.12 × 10⁻¹⁹, OR 1.34). 21151128

2011
dbSNP: rs13429458
rs13429458
THADA
A 0.890 GeneticVariation GWASCAT We identified strong evidence of associations between PCOS and three loci: 2p16.3 (rs13405728; combined P-value by meta-analysis P(meta) = 7.55 × 10⁻²¹, odds ratio (OR) 0.71); 2p21 (rs13429458, P(meta) = 1.73 × 10⁻²³, OR 0.67); and 9q33.3 (rs2479106, P(meta) = 8.12 × 10⁻¹⁹, OR 1.34). 21151128

2011
dbSNP: rs10818854
rs10818854
DENND1A
A 0.830 GeneticVariation GWASCAT Genome-wide association study identifies susceptibility loci for polycystic ovary syndrome on chromosome 2p16.3, 2p21 and 9q33.3. 21151128

2011
dbSNP: rs12478601
rs12478601
THADA
C 0.820 GeneticVariation GWASCAT Genome-wide association study identifies susceptibility loci for polycystic ovary syndrome on chromosome 2p16.3, 2p21 and 9q33.3. 21151128

2011
dbSNP: rs13405728
rs13405728
LHCGR ; STON1-GTF2A1L
A 0.900 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs2479106
rs2479106
DENND1A
G 0.900 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs13429458
rs13429458
THADA
A 0.890 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs2059807
rs2059807
INSR
G 0.830 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs2268361
rs2268361
FSHR
C 0.810 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs2272046
rs2272046
HMGA2
A 0.810 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs3802457
rs3802457
AOPEP
G 0.810 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs705702
rs705702
RAB5B ; SUOX
G 0.810 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs1894116
rs1894116
YAP1
G 0.800 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs4784165
rs4784165
LOC107984901
G 0.800 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs6022786
rs6022786 		A 0.800 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs10505648
rs10505648
LINC02055
A 0.700 GeneticVariation GWASCAT Genome-wide association study identified new susceptibility loci for polycystic ovary syndrome. 25574032

2015
dbSNP: rs11031006
rs11031006
LOC105376607
A 0.710 GeneticVariation GWASCAT The same chr 11p14.1 SNP, rs11031006, in the region of the follicle-stimulating hormone B polypeptide (FSHB) gene strongly associates with PCOS diagnosis and luteinizing hormone levels. 26284813

2015
dbSNP: rs10993397
rs10993397
AOPEP
C 0.700 GeneticVariation GWASCAT Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations. 26284813

2015
dbSNP: rs112137861
rs112137861
SOX5
A 0.700 GeneticVariation GWASCAT Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations. 26284813

2015
dbSNP: rs1355471
rs1355471
CCDC91 ; LOC101928705
A 0.700 GeneticVariation GWASCAT Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations. 26284813

2015
dbSNP: rs140485756
rs140485756 		C 0.700 GeneticVariation GWASCAT Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations. 26284813

2015
dbSNP: rs1784692
rs1784692
ZBTB16
T 0.700 GeneticVariation GWASCAT Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations. 26284813

2015
dbSNP: rs56949836
rs56949836 		T 0.700 GeneticVariation GWASCAT Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations. 26284813

2015
dbSNP: rs74585555
rs74585555 		A 0.700 GeneticVariation GWASCAT Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations. 26284813

2015