Source: GWASCAT ×
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs13405728
rs13405728
LHCGR ; STON1-GTF2A1L
A 0.900 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs13405728
rs13405728
LHCGR ; STON1-GTF2A1L
A 0.900 GeneticVariation GWASCAT We identified strong evidence of associations between PCOS and three loci: 2p16.3 (rs13405728; combined P-value by meta-analysis P(meta) = 7.55 × 10⁻²¹, odds ratio (OR) 0.71); 2p21 (rs13429458, P(meta) = 1.73 × 10⁻²³, OR 0.67); and 9q33.3 (rs2479106, P(meta) = 8.12 × 10⁻¹⁹, OR 1.34). 21151128

2011
dbSNP: rs13429458
rs13429458
THADA
A 0.890 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs13429458
rs13429458
THADA
A 0.890 GeneticVariation GWASCAT We identified strong evidence of associations between PCOS and three loci: 2p16.3 (rs13405728; combined P-value by meta-analysis P(meta) = 7.55 × 10⁻²¹, odds ratio (OR) 0.71); 2p21 (rs13429458, P(meta) = 1.73 × 10⁻²³, OR 0.67); and 9q33.3 (rs2479106, P(meta) = 8.12 × 10⁻¹⁹, OR 1.34). 21151128

2011
dbSNP: rs10818854
rs10818854
DENND1A
A 0.830 GeneticVariation GWASCAT Genome-wide association study identifies susceptibility loci for polycystic ovary syndrome on chromosome 2p16.3, 2p21 and 9q33.3. 21151128

2011
dbSNP: rs2272046
rs2272046
HMGA2
A 0.810 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs6022786
rs6022786 		A 0.800 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012
dbSNP: rs11031006
rs11031006
LOC105376607
A 0.710 GeneticVariation GWASCAT The same chr 11p14.1 SNP, rs11031006, in the region of the follicle-stimulating hormone B polypeptide (FSHB) gene strongly associates with PCOS diagnosis and luteinizing hormone levels. 26284813

2015
dbSNP: rs11031006
rs11031006
LOC105376607
A 0.710 GeneticVariation GWASCAT Causal mechanisms and balancing selection inferred from genetic associations with polycystic ovary syndrome. 26416764

2015
dbSNP: rs10505648
rs10505648
LINC02055
A 0.700 GeneticVariation GWASCAT Genome-wide association study identified new susceptibility loci for polycystic ovary syndrome. 25574032

2015
dbSNP: rs10739076
rs10739076 		A 0.700 GeneticVariation GWASCAT Large-scale genome-wide meta-analysis of polycystic ovary syndrome suggests shared genetic architecture for different diagnosis criteria. 30566500

2018
dbSNP: rs10760321
rs10760321 		A 0.700 GeneticVariation GWASCAT Causal mechanisms and balancing selection inferred from genetic associations with polycystic ovary syndrome. 26416764

2015
dbSNP: rs112137861
rs112137861
SOX5
A 0.700 GeneticVariation GWASCAT Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations. 26284813

2015
dbSNP: rs11225154
rs11225154
YAP1
A 0.700 GeneticVariation GWASCAT Large-scale genome-wide meta-analysis of polycystic ovary syndrome suggests shared genetic architecture for different diagnosis criteria. 30566500

2018
dbSNP: rs11225154
rs11225154
YAP1
A 0.700 GeneticVariation GWASCAT Causal mechanisms and balancing selection inferred from genetic associations with polycystic ovary syndrome. 26416764

2015
dbSNP: rs1355471
rs1355471
CCDC91 ; LOC101928705
A 0.700 GeneticVariation GWASCAT Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations. 26284813

2015
dbSNP: rs2060941
rs2060941
IKZF3
A 0.700 GeneticVariation GWASCAT High Genetic Risk Scores of ASIC2, MACROD2, CHRM3, and C2orf83 Genetic Variants Associated with Polycystic Ovary Syndrome Impair Insulin Sensitivity and Interact with Energy Intake in Korean Women. 30343302

2019
dbSNP: rs2178575
rs2178575
ERBB4
A 0.700 GeneticVariation GWASCAT Large-scale genome-wide meta-analysis of polycystic ovary syndrome suggests shared genetic architecture for different diagnosis criteria. 30566500

2018
dbSNP: rs2271194
rs2271194
ERBB3
A 0.700 GeneticVariation GWASCAT Large-scale genome-wide meta-analysis of polycystic ovary syndrome suggests shared genetic architecture for different diagnosis criteria. 30566500

2018
dbSNP: rs7218361
rs7218361 		A 0.700 GeneticVariation GWASCAT Causal mechanisms and balancing selection inferred from genetic associations with polycystic ovary syndrome. 26416764

2015
dbSNP: rs74585555
rs74585555 		A 0.700 GeneticVariation GWASCAT Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations. 26284813

2015
dbSNP: rs7563201
rs7563201
THADA
A 0.700 GeneticVariation GWASCAT Large-scale genome-wide meta-analysis of polycystic ovary syndrome suggests shared genetic architecture for different diagnosis criteria. 30566500

2018
dbSNP: rs76169311
rs76169311
CRB1
A 0.700 GeneticVariation GWASCAT Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations. 26284813

2015
dbSNP: rs7864171
rs7864171
AOPEP
A 0.700 GeneticVariation GWASCAT Large-scale genome-wide meta-analysis of polycystic ovary syndrome suggests shared genetic architecture for different diagnosis criteria. 30566500

2018
dbSNP: rs804279
rs804279 		A 0.700 GeneticVariation GWASCAT Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations. 26284813

2015