Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs397514465
rs397514465
0.010 GeneticVariation BEFREE Ten studies described MTHFR C677T (108 with TT genotype and 2018 with CC genotype) -homocysteine relationship and six studies (735 stroke cases and 713 controls) described homocysteine-ischemic stroke relationship. 23505425

2013

dbSNP: rs702553
rs702553
0.010 GeneticVariation BEFREE Previous research has shown the single nucleotide polymorphism (rs702553) on the PDE4D gene to be associated with stroke and carotid atherosclerosis. 23778321

2013

dbSNP: rs152312
rs152312
0.010 GeneticVariation BEFREE We selected and genotyped a PDE4D single nucleotide polymorphism (SNP 41, rs152312) as a candidate marker for susceptibility to ischemic stroke because SNP 41 has shown the most significant association with stroke in both a meta-analysis and the original Icelandic study of the PDE4D gene. 19399275

2009

dbSNP: rs2910829
rs2910829
0.010 GeneticVariation BEFREE Three SNPs (single nucleotide polymorphisms) (rs966221, rs456009 and rs2910829) in PDE4D were chosen based on the significant association with stroke reported previously in a Western population, and these were genotyped using PCR/RFLP (restriction-fragment-length polymorphism) and confirmed by sequencing. 18694398

2009

dbSNP: rs456009
rs456009
0.010 GeneticVariation BEFREE Three SNPs (single nucleotide polymorphisms) (rs966221, rs456009 and rs2910829) in PDE4D were chosen based on the significant association with stroke reported previously in a Western population, and these were genotyped using PCR/RFLP (restriction-fragment-length polymorphism) and confirmed by sequencing. 18694398

2009

dbSNP: rs966221
rs966221
0.010 GeneticVariation BEFREE We found that only SNP83 (rs966221) was associated with stroke. 18694398

2009

dbSNP: rs1186757238
rs1186757238
0.010 GeneticVariation BEFREE In this study, we performed a genetic association study on the single nucleotide polymorphisms (SNPs) present in the genes CD14 (-159 C/T), TNFalpha (-308 G/A), IL-1alpha (-889 C/T), IL-6 (-174 G/C), PSMA6 (-8 C/G), and PDE4D (SNP83 T/C, respectively) in order to discern their possible role in the susceptibility to stroke in a North Indian population. 18158110

2008

dbSNP: rs918592
rs918592
0.010 GeneticVariation BEFREE The association of rs918592 with stroke was confined exclusively to current smokers (OR=3.2, P=0.00014), with no association observed among never-smokers (OR=0.9, P=0.75) or former smokers (OR=1.2, P=0.66), demonstrating a gene-environment interaction (P=0.03). 16835261

2006