Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs555607708
rs555607708
A 0.700 CausalMutation CLINVAR

dbSNP: rs797044481
rs797044481
TAA 0.700 GeneticVariation CLINVAR

dbSNP: rs797044482
rs797044482
GT 0.700 GeneticVariation CLINVAR

dbSNP: rs797044483
rs797044483
G 0.700 GeneticVariation CLINVAR

dbSNP: rs113488022
rs113488022
0.020 GeneticVariation BEFREE Two patients with treatment-refractory high-grade colorectal neuroendocrine tumors harboring BRAF(V600E) exhibited rapid and durable response to combined BRAF-MEK inhibition, providing the first clinical evidence of efficacy in this aggressive tumor type.Cancer Discov; 6(6); 594-600. 27048246

2016

dbSNP: rs113488022
rs113488022
0.020 GeneticVariation BEFREE Identification of the BRAF V600E mutation in gastroenteropancreatic neuroendocrine tumors. 26684240

2016

dbSNP: rs121913377
rs121913377
0.020 GeneticVariation BEFREE Two patients with treatment-refractory high-grade colorectal neuroendocrine tumors harboring BRAF(V600E) exhibited rapid and durable response to combined BRAF-MEK inhibition, providing the first clinical evidence of efficacy in this aggressive tumor type.Cancer Discov; 6(6); 594-600. 27048246

2016

dbSNP: rs121913377
rs121913377
0.020 GeneticVariation BEFREE Identification of the BRAF V600E mutation in gastroenteropancreatic neuroendocrine tumors. 26684240

2016

dbSNP: rs104894097
rs104894097
0.010 GeneticVariation BEFREE TP53 (p.R337C and p.R213*), PTEN (p.W111*, p.Q214*), CDKN2A (p.W110*), FBXW7 (p.R465H), and AKT1 (p.R23Q) were repetitive mutations found exclusively in rectal NETs, whereas SMAD4 (p.R361C) and STK11 (p.D176N) were repetitive mutations found only in gastric NETs. 30851333

2019

dbSNP: rs1060501206
rs1060501206
0.010 GeneticVariation BEFREE TP53 (p.R337C and p.R213*), PTEN (p.W111*, p.Q214*), CDKN2A (p.W110*), FBXW7 (p.R465H), and AKT1 (p.R23Q) were repetitive mutations found exclusively in rectal NETs, whereas SMAD4 (p.R361C) and STK11 (p.D176N) were repetitive mutations found only in gastric NETs. 30851333

2019

dbSNP: rs121909233
rs121909233
0.010 GeneticVariation BEFREE TP53 (p.R337C and p.R213*), PTEN (p.W111*, p.Q214*), CDKN2A (p.W110*), FBXW7 (p.R465H), and AKT1 (p.R23Q) were repetitive mutations found exclusively in rectal NETs, whereas SMAD4 (p.R361C) and STK11 (p.D176N) were repetitive mutations found only in gastric NETs. 30851333

2019

dbSNP: rs121913520
rs121913520
KIT
0.010 GeneticVariation BEFREE PTEN (p.G129K), EGFR (p.E709K), and KIT (p.V555I) were shared mutations between rectal and appendiceal NETs, whereas SMAD4 (p.R361C), ALK (p.G1202R), VHL (p.Q132*), and IDH1 (p.R132H) were concurrently detected between rectal and gastric NETs. 30851333

2019

dbSNP: rs1459045148
rs1459045148
0.010 GeneticVariation BEFREE TP53 (p.R337C and p.R213*), PTEN (p.W111*, p.Q214*), CDKN2A (p.W110*), FBXW7 (p.R465H), and AKT1 (p.R23Q) were repetitive mutations found exclusively in rectal NETs, whereas SMAD4 (p.R361C) and STK11 (p.D176N) were repetitive mutations found only in gastric NETs. 30851333

2019

dbSNP: rs730881979
rs730881979
0.010 GeneticVariation BEFREE TP53 (p.R337C and p.R213*), PTEN (p.W111*, p.Q214*), CDKN2A (p.W110*), FBXW7 (p.R465H), and AKT1 (p.R23Q) were repetitive mutations found exclusively in rectal NETs, whereas SMAD4 (p.R361C) and STK11 (p.D176N) were repetitive mutations found only in gastric NETs. 30851333

2019

dbSNP: rs730882002
rs730882002
0.010 GeneticVariation BEFREE TP53 (p.R337C and p.R213*), PTEN (p.W111*, p.Q214*), CDKN2A (p.W110*), FBXW7 (p.R465H), and AKT1 (p.R23Q) were repetitive mutations found exclusively in rectal NETs, whereas SMAD4 (p.R361C) and STK11 (p.D176N) were repetitive mutations found only in gastric NETs. 30851333

2019

dbSNP: rs36053993
rs36053993
0.010 GeneticVariation BEFREE A heterozygous variant causing an amino acid substitution p.(Gly396Asp) in the MutY DNA glycosylase gene (<i>MUTYH</i>) was significantly enriched in SI-NET patients (minor allele frequencies 0.013 and 0.003 for patients and controls respectively) and resulted in odds ratio of 5.09 (95% confidence interval 1.56-14.74; <i>P</i> value = 0.0038). 28634180

2017

dbSNP: rs351855
rs351855
0.010 GeneticVariation BEFREE The Gly388Arg FGFR4 polymorphism does not seem to have a prognostic value in digestive NET. 26335532

2016

dbSNP: rs397517132
rs397517132
0.010 GeneticVariation BEFREE Identification of the BRAF V600E mutation in gastroenteropancreatic neuroendocrine tumors. 26684240

2016

dbSNP: rs777980327
rs777980327
APC
0.010 GeneticVariation BEFREE Identification of the BRAF V600E mutation in gastroenteropancreatic neuroendocrine tumors. 26684240

2016

dbSNP: rs869025667
rs869025667
VHL
0.010 GeneticVariation BEFREE A novel missense mutation (p.L198P) was identified in the VHL gene in the patient from family C. This p.L198P mutation caused a phenotype with early onset of a neuroendocrine tumor of the pancreas, bilateral pheochromocytomas, and optic nerve hemangioblastoma. 24555745

2014

dbSNP: rs121908586
rs121908586
0.010 GeneticVariation BEFREE Multiple GISTs and other tumors may be caused by germline PDGFRA gene mutations; the V561D mutation can occur in the germline state and lead to a syndrome that should not be confused with other genetic conditions associated with a predisposition to NETs and other tumors. 17566086

2007

dbSNP: rs121913521
rs121913521
KIT
0.010 GeneticVariation BEFREE Multiple GISTs and other tumors may be caused by germline PDGFRA gene mutations; the V561D mutation can occur in the germline state and lead to a syndrome that should not be confused with other genetic conditions associated with a predisposition to NETs and other tumors. 17566086

2007