Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs10433937
rs10433937
0.010 GeneticVariation BEFREE We found that SERPINA1 Pi*S variant conferred an increased risk of developing liver fibrosis, while SERPINA1 Pi*Z and HSD17B13 rs10433937 were not associated with liver fibrosis or cirrhosis of different aetiology. 31517326

2019

dbSNP: rs1544410
rs1544410
VDR
0.010 GeneticVariation BEFREE Old age (p = 5.05 × 10<sup>-8</sup>), high body mass index (p = 2.13 × 10<sup>-2</sup>), low total-cholesterol (p = 1.46 × 10<sup>-4</sup>), low serum vitamin D level (p = 7.34 × 10<sup>-3</sup>), and VDR rs1544410 genotype CC (p = 9.15 × 10<sup>-3</sup>) were independent factors associated with advanced liver fibrosis. 30683615

2019

dbSNP: rs2228570
rs2228570
VDR
0.010 GeneticVariation BEFREE The <i>FokI</i> rs2228570 TT/TC genotypes (OR = 1.63, 95% CI [1.06-2.51], <i>p</i> = 0.03) and age ≥55 years (OR = 2.25; 95% CI [1.54-3.32], <i>p</i> < 0.001) were independently associated with advanced liver fibrosis, assessed based on FIB-4 score >3.25. 31565578

2019

dbSNP: rs6920220
rs6920220
0.010 GeneticVariation BEFREE The aim of this study was to analyze the associations between genetic variants upstream of TNFAIP3 (rs675520, rs9376293 and rs6920220) and liver fibrosis severity and inflammation in HIV/HCV-coinfected patients. 30336268

2019

dbSNP: rs72613567
rs72613567
0.010 GeneticVariation BEFREE HSD17B13 rs10433937 (in high linkage disequilibrium with rs72613567; r 2 =0.96) also showed no overall association with liver disease, but the GG- genotype was associated with reduced risk of liver fibrosis (aOR 0.37, p=0.03). 31517326

2019

dbSNP: rs1143627
rs1143627
0.010 GeneticVariation BEFREE The AA genotype at rs16944 and the CC genotype at rs1143627 in the gene encoding IL-1β were associated with higher serum IL-1β levels and liver fibrosis. 29390144

2018

dbSNP: rs16944
rs16944
0.010 GeneticVariation BEFREE The AA genotype at rs16944 and the CC genotype at rs1143627 in the gene encoding IL-1β were associated with higher serum IL-1β levels and liver fibrosis. 29390144

2018

dbSNP: rs4588
rs4588
GC
0.010 GeneticVariation BEFREE Although the rs7041 and rs4588 GC polymorphisms are strong predictors of vitamin D levels, they do not play a direct role in liver fibrosis. 28809744

2018

dbSNP: rs6897932
rs6897932
0.010 GeneticVariation BEFREE The IL7RA rs6897932 polymorphism seems to be related to increased risk of liver fibrosis progression in HCV-infected patients. 29742149

2018

dbSNP: rs7041
rs7041
GC
0.010 GeneticVariation BEFREE Although the rs7041 and rs4588 GC polymorphisms are strong predictors of vitamin D levels, they do not play a direct role in liver fibrosis. 28809744

2018

dbSNP: rs1127354
rs1127354
0.010 GeneticVariation BEFREE Multivariate analysis showed that IPTA rs1127354 non-genotype CC, HCV genotype, a baseline HCV RNA level <4 × 10 IU/mL, IL-28B rs12979860 genotype CC, and low liver fibrosis were independent predictors for SVR during the combination therapy.IPTA rs1127354 variants and related ITPase were not only related with ribavirin-induced hemolytic anemia but also directly affected the SVR to PEG-IFN plus ribavirin combination therapy in Chinese HCV-infected patients. 28723780

2017

dbSNP: rs11558492
rs11558492
0.010 GeneticVariation BEFREE Our findings indicate that GNPAT rs11558492 is not a major modifier of iron status and is not associated with liver fibrosis in HFE-HH patients. 28425416

2017

dbSNP: rs12785878
rs12785878
0.010 GeneticVariation BEFREE By multivariate analysis, liver fibrosis stage 0-1 (OR = 5.00; 95% CI, 2.02-12.37; P < 0.001), and DHCR7 rs12785878 GT/TT allele (OR = 2.69; 95% CI, 1.03-7.05; P = 0.04) were independent pre-treatment predictors of SVR following PEG-IFN-based therapy in HCV genotype 1 patients. 28415985

2017

dbSNP: rs16851720
rs16851720
0.010 GeneticVariation BEFREE Our study showed that PNPLA3 rs738409 and RNF7 rs16851720 confer an increased risk of developing liver fibrosis and cirrhosis in this Eastern European population, while the MERTK and PCSK7 SNPs are not associated with these conditions. 28338112

2017

dbSNP: rs17047200
rs17047200
0.010 GeneticVariation BEFREE Multivariate analysis showed rs17047200 AT/TT to be an independent risk factor for HCC (hazard ratio, 1.78; P = .008), along with male sex, older age, lower level of albumin, advanced stage of hepatic fibrosis, presence of diabetes, and higher post-treatment level of α-fetoprotein. 28163062

2017

dbSNP: rs2596542
rs2596542
0.010 GeneticVariation BEFREE Serum level and single nucleotide polymorphism at rs2596542 of MICA were tested for the association with liver fibrosis in 319 biopsy proven chronic hepatitis C patients. 28427234

2017

dbSNP: rs3480
rs3480
0.010 GeneticVariation BEFREE Fibronectin Type III Domain-Containing Protein 5 rs3480 A>G Polymorphism, Irisin, and Liver Fibrosis in Patients With Nonalcoholic Fatty Liver Disease. 28472477

2017

dbSNP: rs1001179
rs1001179
CAT
0.010 GeneticVariation BEFREE This study aimed to investigate the association of genetic polymorphisms of CAT C-262T (rs1001179) and GPX1 Pro198Leu (rs1050450) with different stages of liver fibrosis and development of hepatocellular carcinoma (HCC). 26990426

2016

dbSNP: rs1050450
rs1050450
0.010 GeneticVariation BEFREE This study aimed to investigate the association of genetic polymorphisms of CAT C-262T (rs1001179) and GPX1 Pro198Leu (rs1050450) with different stages of liver fibrosis and development of hepatocellular carcinoma (HCC). 26990426

2016

dbSNP: rs1060500764
rs1060500764
0.010 GeneticVariation BEFREE Overexpression of HNRNPA1 (or its T51A mutant) in HSCs of mice inhibited liver fibrosis. 26435271

2016

dbSNP: rs1063303
rs1063303
0.010 GeneticVariation BEFREE Patients with TRIM22 rs1063303 GG genotype had higher proportion of significant liver fibrosis than patients with rs1063303 CC/CG genotypes (p = 0.021), and they had increased odds of having significant hepatic fibrosis (aOR = 2.19; p = 0.034). 27590274

2016

dbSNP: rs10833
rs10833
0.010 GeneticVariation BEFREE The presence of IL15 rs10833 AA genotype in HIV-/HCV-co-infected patients was associated with advanced liver fibrosis, inflammation-related biomarkers and increased rates of SVR to pegIFN-alpha/RBV therapy. 26836972

2016

dbSNP: rs781521972
rs781521972
0.010 GeneticVariation BEFREE Overexpression of HNRNPA1 (or its T51A mutant) in HSCs of mice inhibited liver fibrosis. 26435271

2016

dbSNP: rs900837802
rs900837802
0.010 GeneticVariation BEFREE Overexpression of HNRNPA1 (or its T51A mutant) in HSCs of mice inhibited liver fibrosis. 26435271

2016

dbSNP: rs10336
rs10336
0.010 GeneticVariation BEFREE The homozygosity for the minor alleles CXCL9 rs10336 (T), CXCL10 rs3921 (G), and CXCL11 rs4619915 (A) is associated with the higher likelihood of significant liver fibrosis in HIV-infected patients coinfected with HCV-GT1. 25559603

2015