Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs4986790
rs4986790
0.060 GeneticVariation BEFREE Altered Th17 Cytokine Expression in Helicobacter pylori Patients with TLR4 (D299G) Polymorphism. 26853914

2016

dbSNP: rs4986790
rs4986790
0.060 GeneticVariation BEFREE The goal of this study was to analyze the role of Toll-like receptor 4 polymorphisms +896 (rs4986790) and +1196 (rs4986791) in the pathogenesis of Helicobacter pylori related gastroduodenal diseases in relation to gastric secretion and inflammation. 26161647

2015

dbSNP: rs4986790
rs4986790
0.060 GeneticVariation BEFREE However, we detected that A allele carriers of the TLR4 Asp299Gly polymorphism might have an increase risk of gastric cancer in the Helicobacter pylori-positive population (G allele vs. A allele: OR=2.01, 95%CI: 1.22, 3.31). 24007538

2013

dbSNP: rs4986790
rs4986790
0.060 GeneticVariation BEFREE There was no association between TLR4 Asp299Gly polymorphism and any type of lesions, except for a slight nonsignificant increase in risk of IM associated with the AA genotype among subjects with a higher histological HP score. 17171451

2007

dbSNP: rs4986790
rs4986790
0.060 GeneticVariation BEFREE A Toll-like receptor-4 (TLR-4) Asp299Gly and Thr399Ileu substitution reduces responsiveness to Helicobacter pylori (H. pylori) lipopolysaccharide. 18082569

2007

dbSNP: rs4986790
rs4986790
0.060 GeneticVariation BEFREE We genotyped 87 patients with gastric mucosa-associated lymphoid tissue (MALT) lymphoma, 594 Helicobacter pylori positive controls and 358 healthy blood donors to investigate an association of TLR4 Asp299Gly in the development of gastric MALT lymphoma. 16019531

2005

dbSNP: rs1045642
rs1045642
0.020 GeneticVariation BEFREE Several studies have reported that multidrug resistance gene 1 (MDR1) C3435T polymorphism was associated with the rate of Helicobacter pylori (H. pylori) eradication in proton pump inhibitor (PPI)-based triple therapy. 28353592

2017

dbSNP: rs1045642
rs1045642
0.020 GeneticVariation BEFREE P-glycoprotein expression in Helicobacter pylori-positive patients: the influence of MDR1 C3435T polymorphism. 22788927

2012

dbSNP: rs2910164
rs2910164
0.020 GeneticVariation BEFREE This study aimed to examine the associations of the miR-146a G/C (rs2910164) and TLR4 +3725 G/C (rs11536889) polymorphisms with the risk of Helicobacter pylori (H. pylori) infection, gastric atrophy, and gastric cancer in a Japanese population. 20721625

2011

dbSNP: rs2910164
rs2910164
0.020 GeneticVariation BEFREE We evaluated the associations of three SNPs (rs11614913, rs2910164, and rs3746444) in pre-miRNAs (miR-196a2, miR-146a, and miR-499) with the risk of gastric cancer (GC) and peptic ulcer diseases, and with the severity of Helicobacter pylori-induced gastritis in Japanese population. 21073609

2010

dbSNP: rs20417
rs20417
0.010 GeneticVariation BEFREE Helicobacter pylori positive patients and those with the COX-2 rs20417 polymorphism had a higher risk of developing GC. 31045826

2019

dbSNP: rs1057317
rs1057317
0.010 GeneticVariation BEFREE It was found that, in HP-positive patient, the AA genotype of the rs1057317 polymorphism was closely associated with the risk of GC (95% confidence interval, 1.12 to 2.70; odds ratio, 1.74; P = 0.0129). 30242897

2018

dbSNP: rs3761548
rs3761548
0.010 GeneticVariation BEFREE Here, we investigated IL-35 levels and a single nucleotide polymorphism, rs3761548, in FOXP3 gene in Helicobacter pylori-infected patients with peptic ulcer (PU), to clarify possible associations. 29938865

2018

dbSNP: rs1250915035
rs1250915035
TNF
0.010 GeneticVariation BEFREE The aim of our study was to investigate the impact of interleukin (IL)-6 190C/T, IL-6 174G/C, IL-6 572G/C, tumor necrosis factor-alpha (TNF-α) 308G/A, and angiotensin-converting enzyme (ACE) I/D gene polymorphisms on Helicobacter pylori (H. pylori) infection in children.A cross-sectional study was performed on 126 children (57 children with H. pylori infection and 69 children without H. pylori infection) aged between 3 and 18 years presenting to a Pediatrics Tertiary Hospital from Romania. 28746216

2017

dbSNP: rs747126003
rs747126003
0.010 GeneticVariation BEFREE The aim of our study was to investigate the impact of interleukin (IL)-6 190C/T, IL-6 174G/C, IL-6 572G/C, tumor necrosis factor-alpha (TNF-α) 308G/A, and angiotensin-converting enzyme (ACE) I/D gene polymorphisms on Helicobacter pylori (H. pylori) infection in children.A cross-sectional study was performed on 126 children (57 children with H. pylori infection and 69 children without H. pylori infection) aged between 3 and 18 years presenting to a Pediatrics Tertiary Hospital from Romania. 28746216

2017

dbSNP: rs895819
rs895819
0.010 GeneticVariation BEFREE MiR-27a rs895819 is involved in increased atrophic gastritis risk, improved gastric cancer prognosis and negative interaction with Helicobacter pylori. 28150722

2017

dbSNP: rs1002765
rs1002765
0.010 GeneticVariation BEFREE This study aimed to explore the interaction of the let-7e rs8111742, miR-365b rs121224, and miR-4795 rs1002765 single nucleotide polymorphisms (SNPs) with SNPs of the predicted target gene PGC and Helicobacter pylori status in GC and atrophic gastritis (AG) risk. 26988755

2016

dbSNP: rs121224
rs121224
0.010 GeneticVariation BEFREE This study aimed to explore the interaction of the let-7e rs8111742, miR-365b rs121224, and miR-4795 rs1002765 single nucleotide polymorphisms (SNPs) with SNPs of the predicted target gene PGC and Helicobacter pylori status in GC and atrophic gastritis (AG) risk. 26988755

2016

dbSNP: rs4986791
rs4986791
0.010 GeneticVariation BEFREE The goal of this study was to analyze the role of Toll-like receptor 4 polymorphisms +896 (rs4986790) and +1196 (rs4986791) in the pathogenesis of Helicobacter pylori related gastroduodenal diseases in relation to gastric secretion and inflammation. 26161647

2015

dbSNP: rs1800896
rs1800896
0.010 GeneticVariation BEFREE Eight single nucleotide polymorphisms were associated with spontaneous production of IL-10 in culture, of which three (rs1800896 and rs1878672, p = .04; rs3024491, p = .01) were strongly associated with infection by Helicobacter pylori. 24628819

2014

dbSNP: rs1878672
rs1878672
0.010 GeneticVariation BEFREE Eight single nucleotide polymorphisms were associated with spontaneous production of IL-10 in culture, of which three (rs1800896 and rs1878672, p = .04; rs3024491, p = .01) were strongly associated with infection by Helicobacter pylori. 24628819

2014

dbSNP: rs3024491
rs3024491
0.010 GeneticVariation BEFREE Eight single nucleotide polymorphisms were associated with spontaneous production of IL-10 in culture, of which three (rs1800896 and rs1878672, p = .04; rs3024491, p = .01) were strongly associated with infection by Helicobacter pylori. 24628819

2014

dbSNP: rs5743618
rs5743618
0.010 GeneticVariation BEFREE TLR1 1805T/G showed statistical differences when the control (Hp-) and infected (Hp+) groups (P = 0.041*) were compared; the TLR1 1805G allele had a protective effect towards infection (OR = 0.1; 95% CI = 0.01-0.88, P = 0.033*). 24754375

2014

dbSNP: rs601338
rs601338
0.010 GeneticVariation BEFREE Helicobacter pylori serologic status has no influence on the association between fucosyltransferase 2 polymorphism (FUT2 461 G->A) and vitamin B-12 in Europe and West Africa. 22237057

2012

dbSNP: rs11536889
rs11536889
0.010 GeneticVariation BEFREE This study aimed to examine the associations of the miR-146a G/C (rs2910164) and TLR4 +3725 G/C (rs11536889) polymorphisms with the risk of Helicobacter pylori (H. pylori) infection, gastric atrophy, and gastric cancer in a Japanese population. 20721625

2011