Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs104893624
rs104893624
0.750 GeneticVariation BEFREE To characterize novel genetic causes of the syndrome, we recruited a pediatric patient with possible WHIM syndrome, performed CXCR4 gene sequencing and compared his clinical phenotype and CXCR4 tail amino acid sequences with other patients with WHIM syndrome carrying CXCR4 (R334X) mutations. 27059040

2016

dbSNP: rs104893624
rs104893624
0.750 GeneticVariation BEFREE Deletion of the 238-246 motif accelerated CXCL12-induced wild-type (WT) receptor endocytosis but enabled CXCL12-mediated endocytosis and normalized signaling by the WHIM-associated receptor CXCR4(R334X). 25355818

2015

dbSNP: rs104893624
rs104893624
A 0.750 CausalMutation CLINVAR Chromothriptic cure of WHIM syndrome. 25662009

2015

dbSNP: rs104893624
rs104893624
A 0.750 CausalMutation CLINVAR The CXCR4 mutations in WHIM syndrome impair the stability of the T-cell immunologic synapse. 23794067

2013

dbSNP: rs104893624
rs104893624
0.750 GeneticVariation BEFREE Accordingly, like CXCR4(R334X), the most common truncation mutation in WHIM syndrome, CXCR4(E343K) mediated approximately 2-fold increased signaling in calcium flux and chemotaxis assays relative to wild-type CXCR4; however, CXCR4(E343K) had a reduced effect on blocking normal receptor down-regulation from the cell surface. 22596258

2012

dbSNP: rs104893624
rs104893624
0.750 GeneticVariation BEFREE Together, our data provide further evidence that CXCR4(R334X) is a gain-of-function mutation, and support clinical evaluation of AMD3100 as mechanism-based treatment in patients with WHIM syndrome. 21070597

2011

dbSNP: rs104893624
rs104893624
0.750 GeneticVariation BEFREE A nonsense mutation (C-->T) truncating the CXC chemokine receptor 4 (CXCR4) C-terminal cytoplasmic tail domain occurred at nucleotide position 1000(R334X) of the CXCR4 gene in one allele of the patient was identified, and the person was diagnosed as having WHIM syndrome. 19476565

2009

dbSNP: rs104893624
rs104893624
A 0.750 CausalMutation CLINVAR Impaired recruitment of Grk6 and beta-Arrestin 2 causes delayed internalization and desensitization of a WHIM syndrome-associated CXCR4 mutant receptor. 19956569

2009

dbSNP: rs104893624
rs104893624
A 0.750 CausalMutation CLINVAR Mutations in the chemokine receptor gene CXCR4 are associated with WHIM syndrome, a combined immunodeficiency disease. 12692554

2003

dbSNP: rs104893626
rs104893626
0.720 GeneticVariation BEFREE We engineered WM cells to express the most common WHIM (Warts, Hypogammaglobulinemia, Infections and Myelokathexis), CXCR(S338X) mutation in WM. 24912431

2015

dbSNP: rs104893626
rs104893626
0.720 GeneticVariation BEFREE We screened 418 patients with B-cell lymphoproliferative disorders and described the presence of the C1013G/CXCR4 warts, hypogammaglobulinemia, infections, and myelokathexis-associated mutation in 28.2% (37/131) of patients with lymphoplasmacytic lymphoma (Waldenström macroglobulinemia [WM]), being either absent or present in only 7% of other B-cell lymphomas. 24711662

2014

dbSNP: rs104893626
rs104893626
C 0.720 CausalMutation CLINVAR

dbSNP: rs104893625
rs104893625
A 0.700 CausalMutation CLINVAR

dbSNP: rs1240625960
rs1240625960
A 0.700 GeneticVariation CLINVAR

dbSNP: rs730880320
rs730880320
C 0.700 CausalMutation CLINVAR

dbSNP: rs387907272
rs387907272
0.010 GeneticVariation BEFREE Fewer patients with MYD88(L265P) and CXCR4(WHIM/FS or NS) vs MYD88(L265P)CXCR4(WT) presented with adenopathy (P < .01), further delineating differences in disease tropism based on CXCR4 status. 24553177

2014

dbSNP: rs773862672
rs773862672
0.010 GeneticVariation BEFREE We screened 418 patients with B-cell lymphoproliferative disorders and described the presence of the C1013G/CXCR4 warts, hypogammaglobulinemia, infections, and myelokathexis-associated mutation in 28.2% (37/131) of patients with lymphoplasmacytic lymphoma (Waldenström macroglobulinemia [WM]), being either absent or present in only 7% of other B-cell lymphomas. 24711662

2014