Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs2193094
rs2193094
0.700 GeneticVariation GWASCAT Genome-wide association study of susceptibility loci for breast cancer in Sardinian population. 25956309

2015

dbSNP: rs4784223
rs4784223
0.700 GeneticVariation GWASCAT A genome-wide association study of early-onset breast cancer identifies PFKM as a novel breast cancer gene and supports a common genetic spectrum for breast cancer at any age. 24493630

2014

dbSNP: rs8051542
rs8051542
0.070 GeneticVariation BEFREE Significant associations with BC were observed for rs3803662 (dominant comparison: OR, 0.89; 95% CI, 0.84-0.95; P = .0008; recessive comparison: OR, 1.17; 95% CI, 1.07-1.28; P = .0004; over-dominant comparison: OR, 1.07; 95% CI, 1.02-1.11; P = .002; allele comparison: OR, 0.90; 95% CI, 0.86-0.95; P = .0002), rs8051542 (dominant comparison: OR, 0.87; 95% CI, 0.83-0.91; P < .0001; recessive comparison: OR, 1.19; 95% CI, 1.11-1.28; P < .0001; over-dominant comparison: OR, 1.07; 95% CI, 1.02-1.11; P = .004; allele comparison: OR, 0.89; 95% CI, 0.86-0.91; P < .0001), and rs12922061 (dominant comparison: OR, 0.83; 95% CI, 0.73-0.93; P = .002; over-dominant comparison: OR, 1.43; 95% CI, 1.27-1.61; P < .0001) polymorphisms in the overall population. 31324582

2019

dbSNP: rs12443621
rs12443621
0.070 GeneticVariation BEFREE Our findings indicate that the GG genotype of rs12443621 is associated with increased breast cancer risk whereas the GA and AA genotypes of rs2981582 are reduced risk in Han Chinese population. 26911390

2016

dbSNP: rs12443621
rs12443621
0.070 GeneticVariation BEFREE The study discovered for the first time that three SNPs (rs9933638, rs12443621, and rs3104746) at the TOX3/LOC643714 locus contributed to lung cancer risk, providing new evidences that lung cancer and breast cancer are linked at the molecular and genetic level to a certain extent. 27486757

2016

dbSNP: rs8051542
rs8051542
0.070 GeneticVariation BEFREE A case‑control study (90‑100 cases; 90‑100 controls) was performed to evaluate five genetic variants of three genes, including FGFR2 (SNPs: rs1219648, rs2981582), TNRC9 (SNPs: rs8051542, rs3803662) and MAP3K1 (SNP: rs889312) as BC risk factors in Pakistani women. 27572905

2016

dbSNP: rs12443621
rs12443621
0.070 GeneticVariation BEFREE We observed that the rs3803662 C > T, rs12443621 A > G and rs8051542 C > T were all correlated with increased risk of breast cancer. 26239137

2015

dbSNP: rs8051542
rs8051542
0.070 GeneticVariation BEFREE In Asian populations, there were significant associations of rs3803662 and rs8051542 with breast cancer risk. 26239137

2015

dbSNP: rs8051542
rs8051542
0.070 GeneticVariation BEFREE Significant associations with breast cancer risk were observed for rs4784227 and rs8051542 with odds ratios (OR) of 1.31 ((95% confidence intervals (CI), 1.10-1.57)) and 1.26 (95% CI, 1.02-1.56), respectively, per T allele. 24481062

2014

dbSNP: rs12443621
rs12443621
0.070 GeneticVariation BEFREE The study results suggest that previously identified breast cancer risk susceptibility loci, rs12443621 (16q12) and rs6504950 (17q23), may influence breast cancer prognosis or comorbid conditions associated with overall survival. 23635555

2013

dbSNP: rs8051542
rs8051542
0.070 GeneticVariation BEFREE Only 5 out of 9 GWAS breast cancer loci were found to be significantly associated with breast cancer in Tunisians: The rs1219648 (G vs. A allele: OR = 1.36, P = 1 × 10(-3)) and rs2981582 (A vs. G allele: OR = 1.55, P = 3 × 10(-6)) of FGFR2 gene; the rs8051542 of the TNRC9 gene (T vs. C allele: OR = 1.40, P = 4 × 10(-4)); the rs889312 of the MAP3K1 gene (C vs. A allele: OR = 1.33, P = 3 × 10(-3)) and the rs13281615 located on 8q24 (G vs. A allele: OR = 1.21, P = 0.03). 22910930

2012

dbSNP: rs12443621
rs12443621
0.070 GeneticVariation BEFREE There is no significant association between TNRC9 rs12443621 and rs8051542 polymorphisms and risk of breast cancer in current literature. 20703937

2011

dbSNP: rs8051542
rs8051542
0.070 GeneticVariation BEFREE There is no significant association between TNRC9 rs12443621 and rs8051542 polymorphisms and risk of breast cancer in current literature. 20703937

2011

dbSNP: rs12443621
rs12443621
0.070 GeneticVariation BEFREE None of the three polymorphisms was significantly associated with breast cancer risk in the whole data set (P = 0.151, 0.644, and 0.737 for rs3803662, rs12443621. and rs8051542, respectively). 20213080

2010

dbSNP: rs12443621
rs12443621
0.070 GeneticVariation BEFREE Interestingly, a significant interaction was detected between rs12443621A/G and ER status on breast cancer risk in a case-only analysis (P for interaction = 0.004). 20213080

2010

dbSNP: rs8051542
rs8051542
0.070 GeneticVariation BEFREE None of the three polymorphisms was significantly associated with breast cancer risk in the whole data set (P = 0.151, 0.644, and 0.737 for rs3803662, rs12443621. and rs8051542, respectively). 20213080

2010

dbSNP: rs8051542
rs8051542
0.070 GeneticVariation BEFREE In the present case-control study of 1,049 breast cancer patients and 1,073 cancer-free controls in a Chinese population, we genotyped three polymorphisms (rs3803662C/T, rs12443621A/G, and rs8051542C/T) of the TNRC9 gene using the SNPstream 12-plex platform to test the hypothesis that these SNPs are associated with breast cancer risk in this population. 20213080

2010

dbSNP: rs12443621
rs12443621
0.070 GeneticVariation BEFREE The association with rs12443621 may provide clues as to how variation in TOX3 influences breast cancer risk. 19232126

2009

dbSNP: rs1420546
rs1420546
0.010 GeneticVariation BEFREE Three SNPs (MMP9 (rs6065912), TOX3 (rs1420546), and DAPK1 (rs11141901) were found to be significantly associated with an increased risk of breast cancer (p < .05). 28272917

2017

dbSNP: rs1123428
rs1123428
0.010 GeneticVariation BEFREE We found that the T allele and the TT genotype of the SNP rs38033662 is significantly associated with risk for breast cancer in Chinese Han women; however, no significant association was found for rs1362548 or rs1123428. 24446301

2014

dbSNP: rs1362548
rs1362548
0.010 GeneticVariation BEFREE We found that the T allele and the TT genotype of the SNP rs38033662 is significantly associated with risk for breast cancer in Chinese Han women; however, no significant association was found for rs1362548 or rs1123428. 24446301

2014