Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1800734
rs1800734
0.040 GeneticVariation BEFREE Using sensitive allele-specific detection methods, we demonstrate that MLH1 is the target gene for rs1800734 mediated cancer risk. 31530880

2019

dbSNP: rs1799977
rs1799977
0.040 GeneticVariation BEFREE To elucidate the veritable relationship between three hMLH1 polymorphisms (rs1800734, rs1799977, rs63750447) and cancer risk, we performed this meta-analysis based on overall published data up to May 2017, from PubMed, Web of knowledge, VIP, WanFang and CNKI database, and the references of the original studies or review articles. 29190978

2017

dbSNP: rs1800734
rs1800734
0.040 GeneticVariation BEFREE This screen identifies the A-allele of rs1800734 within the promoter region of MLH1 as perturbing the binding of TFAP4 and consequently increasing DCLK3 expression through a long-range interaction, which promotes cancer malignancy through enhancing expression of the genes related to epithelial-to-mesenchymal transition. 28195176

2017

dbSNP: rs1799977
rs1799977
0.040 GeneticVariation BEFREE The mutations of MLH1 V384D (15.7%), R217C (4.1%), and I219V (5.2%) were common in this cancer. 27487738

2016

dbSNP: rs876658657
rs876658657
0.040 GeneticVariation BEFREE Our investigations demonstrated that the hMLH1 -93G/A polymorphism is not a candidate for susceptibility to overall cancers, and that the hMLH1 1151T/A polymorphism is significantly associated with higher cancer risk in Asian populations. 23587910

2013

dbSNP: rs1799977
rs1799977
0.040 GeneticVariation BEFREE For the I219V polymorphism, however, there was no main effect associated with overall cancer risk in any genetic model. 22631669

2012

dbSNP: rs1800734
rs1800734
0.040 GeneticVariation BEFREE The -93G>A (rs1800734) polymorphism located in the promoter of mismatch repair gene, MLH1, has been identified as a low-penetrance variant for cancer risk. 23226285

2012

dbSNP: rs876658657
rs876658657
0.040 GeneticVariation BEFREE The -93G>A (rs1800734) polymorphism located in the promoter of mismatch repair gene, MLH1, has been identified as a low-penetrance variant for cancer risk. 23226285

2012

dbSNP: rs876658657
rs876658657
0.040 GeneticVariation BEFREE The meta-analysis suggested that the MLH1 -93G>A polymorphism may be a biomarker of cancer susceptibility. 22631669

2012

dbSNP: rs876658657
rs876658657
0.040 GeneticVariation BEFREE These findings showed no persuasive evidence that MLH1 -93 G/A polymorphism was associated with an increased risk of cancer. 21745804

2011

dbSNP: rs1799977
rs1799977
0.040 GeneticVariation BEFREE When the analysis was restricted to our 'super-controls', healthy individuals with no family history for cancer, also rs1799977:A>G (MLH1 I219V) was associated with an increased risk in both colon and rectum patients with an odds ratio of 1.28 (CI=1.02-1.60) and 1.34 (CI=1.05-1.72), respectively (under the dominant model); while 2 SNPs, rs1800932:A>G (MSH6 P92P) and rs459552:T>A (APC D1822V) seemed to confer a protective effect. 20149637

2010

dbSNP: rs1800734
rs1800734
0.040 GeneticVariation BEFREE We hypothesised that a common substitution in the basal promoter of MLH1 (position -93, rs1800734) modifies the risk of cancer after methylating chemotherapy. 17959715

2008

dbSNP: rs63750447
rs63750447
0.030 GeneticVariation BEFREE To elucidate the veritable relationship between three hMLH1 polymorphisms (rs1800734, rs1799977, rs63750447) and cancer risk, we performed this meta-analysis based on overall published data up to May 2017, from PubMed, Web of knowledge, VIP, WanFang and CNKI database, and the references of the original studies or review articles. 29190978

2017

dbSNP: rs63750447
rs63750447
0.030 GeneticVariation BEFREE The mutations of MLH1 V384D (15.7%), R217C (4.1%), and I219V (5.2%) were common in this cancer. 27487738

2016

dbSNP: rs56250509
rs56250509
0.030 GeneticVariation BEFREE However, we did not find association between polymorphism in MTHFR C677T and risk of hypermethylation in P16, MGMT, hMLH1 and hMLH2 genes either in cancer or remote normal-appearing tissues. 23803092

2013

dbSNP: rs63750447
rs63750447
0.030 GeneticVariation BEFREE Our investigations demonstrated that the hMLH1 -93G/A polymorphism is not a candidate for susceptibility to overall cancers, and that the hMLH1 1151T/A polymorphism is significantly associated with higher cancer risk in Asian populations. 23587910

2013

dbSNP: rs56250509
rs56250509
0.030 GeneticVariation BEFREE To explore the role of aberrant hypermethylation of cancer-related genes, such as P16, MGMT, and hMLH1, in the esophageal squamous cell carcinoma (ESCC) as well as its relation to dietary folate intake and MTHFR C677T polymorphism, we conducted a molecular epidemiologic study in China. 18199718

2008

dbSNP: rs56250509
rs56250509
0.030 GeneticVariation BEFREE When MTHFR C677T genotype frequencies in MSS CRC cases were compared to controls, individuals with homozygous variant genotype were at 19% reduced risk of cancer compared to wild type (OR = 0.81; 95% CI: 0.65-1.02). 17350979

2007

dbSNP: rs587778967
rs587778967
0.020 GeneticVariation BEFREE Two cancer syndrome gene variants likely to affect native translation initiation were identified by clinical genetic testing: MLH1:c.1A>G p.(Met1?) and BRCA2:c.67+3A>G. 24302565

2015

dbSNP: rs773647920
rs773647920
0.020 GeneticVariation BEFREE Two cancer syndrome gene variants likely to affect native translation initiation were identified by clinical genetic testing: MLH1:c.1A>G p.(Met1?) and BRCA2:c.67+3A>G. 24302565

2015

dbSNP: rs587778967
rs587778967
0.020 GeneticVariation BEFREE The carcinomas showed microsatellite instability in the presence of MLH1, PMS2, MSH2 and MSH6 proteins, indicating that the variant c.1A>G leads to an alternative protein with reduced activity that is retained in the tumours.Our data suggest that the MSH2 variant c.1A>G (p.Met1?) should not be considered as a regular pathogenic mutation that leads to a strongly increased cancer risk, though it possibly contributes to a more severe phenotype when combined with a truncating mutation on the other allele. 18781192

2009

dbSNP: rs773647920
rs773647920
0.020 GeneticVariation BEFREE The carcinomas showed microsatellite instability in the presence of MLH1, PMS2, MSH2 and MSH6 proteins, indicating that the variant c.1A>G leads to an alternative protein with reduced activity that is retained in the tumours.Our data suggest that the MSH2 variant c.1A>G (p.Met1?) should not be considered as a regular pathogenic mutation that leads to a strongly increased cancer risk, though it possibly contributes to a more severe phenotype when combined with a truncating mutation on the other allele. 18781192

2009

dbSNP: rs63750339
rs63750339
0.010 GeneticVariation BEFREE Surgically resected ACs (n=59) were examined regarding (1) clinicopathological features, (2) histological subtypes, (3) expression of IMP3, maspin, MUC5AC and S100P and (4) next-generation sequencing using a hybrid capture-based platform (Illumina HiSeq2500), including 315 cancer-related genes plus introns from 28 genes often rearranged or altered in cancer. 31256008

2019

dbSNP: rs4986984
rs4986984
0.010 GeneticVariation BEFREE The mutations of MLH1 V384D (15.7%), R217C (4.1%), and I219V (5.2%) were common in this cancer. 27487738

2016

dbSNP: rs35502531
rs35502531
0.010 GeneticVariation BEFREE We evaluated the role of MLH1 K618A in predisposition to cancer by genotyping 1512 control subjects to assess its frequency in the general population. 22426235

2012