Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs375874539
rs375874539
0.710 GeneticVariation BEFREE Our data showed that (1) the frequency of C609T NQO1 was significantly increased in TNM stage III HCC patients; (2) no significant association was found between p53 expression and C609T polymorphism of NQO1 gene; and (3) a tumor/non-tumor (T/N) ratio > 1.27 of NQO1 expression revealed by real-time qPCR analyses was positively correlated with poorer survival in patients with tumors >5 cm, suggesting that an increase of NQO1 expression may be an indicator of advanced tumor progression. 19688691

2009

dbSNP: rs1288373809
rs1288373809
0.010 GeneticVariation BEFREE Our data showed that (1) the frequency of C609T NQO1 was significantly increased in TNM stage III HCC patients; (2) no significant association was found between p53 expression and C609T polymorphism of NQO1 gene; and (3) a tumor/non-tumor (T/N) ratio > 1.27 of NQO1 expression revealed by real-time qPCR analyses was positively correlated with poorer survival in patients with tumors >5 cm, suggesting that an increase of NQO1 expression may be an indicator of advanced tumor progression. 19688691

2009

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE However, we did not find any main effect of TP53 Arg72Pro on HCC risk in this population. 20309940

2011

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE However, we did not find any main effect of TP53 Arg72Pro on HCC risk in this population. 20309940

2011

dbSNP: rs878854066
rs878854066
0.100 GeneticVariation BEFREE However, we did not find any main effect of TP53 Arg72Pro on HCC risk in this population. 20309940

2011

dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE We suggest that p.R249S may contribute to hepatocarcinogenesis through interaction with HBx, conferring a subtle growth advantage at early steps of the transformation process, but that this interaction is not required for progression to advanced HCC. 20538734

2010

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE Results indicated that Arg72Pro is associated with higher susceptibility to cancer in some tumor sites, mainly hepatocarcinoma. 20886596

2011

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE Results indicated that Arg72Pro is associated with higher susceptibility to cancer in some tumor sites, mainly hepatocarcinoma. 20886596

2011

dbSNP: rs878854066
rs878854066
0.100 GeneticVariation BEFREE Results indicated that Arg72Pro is associated with higher susceptibility to cancer in some tumor sites, mainly hepatocarcinoma. 20886596

2011

dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE TP53 mutations, particularly the hot spot mutations R249S and V157F, are associated with poor prognosis for patients with HCC. 21094160

2011

dbSNP: rs121912654
rs121912654
0.720 GeneticVariation BEFREE TP53 mutations, particularly the hot spot mutations R249S and V157F, are associated with poor prognosis for patients with HCC. 21094160

2011

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE Our data shows that the Pro/Pro genotype of the p53 Arg72Pro polymorphism is associated with increased risk of HCC development in this Turkish population (OR = 3.20, 95% CI: 1.24-8.22, P = 0.02). 21607615

2012

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE Our data shows that the Pro/Pro genotype of the p53 Arg72Pro polymorphism is associated with increased risk of HCC development in this Turkish population (OR = 3.20, 95% CI: 1.24-8.22, P = 0.02). 21607615

2012

dbSNP: rs878854066
rs878854066
0.100 GeneticVariation BEFREE Our data shows that the Pro/Pro genotype of the p53 Arg72Pro polymorphism is associated with increased risk of HCC development in this Turkish population (OR = 3.20, 95% CI: 1.24-8.22, P = 0.02). 21607615

2012

dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE TP53 mutations, particularly the hot spot mutations R249S and V157F, are associated with poor prognosis for patients with HCC. 21616106

2011

dbSNP: rs121912654
rs121912654
0.720 GeneticVariation BEFREE TP53 mutations, particularly the hot spot mutations R249S and V157F, are associated with poor prognosis for patients with HCC. 21616106

2011

dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE HCC often harbors a TP53 (tumor protein p53) mutation at codon 249 (R249S). 21768053

2011

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE There was no evidence for any association with early age of HCC onset when deleterious alleles of MDM2 SNP309 and TP53 Arg72Pro where present. 22180176

2012

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE There was no evidence for any association with early age of HCC onset when deleterious alleles of MDM2 SNP309 and TP53 Arg72Pro where present. 22180176

2012

dbSNP: rs878854066
rs878854066
0.100 GeneticVariation BEFREE There was no evidence for any association with early age of HCC onset when deleterious alleles of MDM2 SNP309 and TP53 Arg72Pro where present. 22180176

2012

dbSNP: rs121912656
rs121912656
0.710 GeneticVariation BEFREE Furthermore, p53(G245D) was shown to have a similar pattern of subcellular localization to ZBP-89 in tissues of HCC patients in Hong Kong. 22214764

2012

dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE Overall, these results support the preferential occurrence of R249S-mutated DNA in HCC developing in the absence of cirrhosis in a context of HBV chronic infection. 22675488

2012

dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE These findings suggest that in HCC from The Gambia, complete HBX sequences are often associated with the presence of TP53 R249S mutation. 22759751

2012

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE The study on p53 Arg72Pro and XRCC1 Arg399Gln polymorphism in HCC patients demonstrated differences in allele frequencies compared to their controls. 23053887

2013

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE The study on p53 Arg72Pro and XRCC1 Arg399Gln polymorphism in HCC patients demonstrated differences in allele frequencies compared to their controls. 23053887

2013