Disease: Malignant neoplasm of breast
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1001179
CAT
0.641 0.680 11 34438684 upstream gene variant C/T snv 0.16 33
rs1008805
MIR4713HG ; CYP19A1
0.851 0.160 15 51257402 intron variant G/A snv 0.64 7
rs1024611 0.568 0.800 17 34252769 upstream gene variant A/G snv 0.28 63
rs10735810
VDR
0.662 0.640 12 47879112 start lost A/C;G;T snv 26
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs1222213359
VEGFA
0.574 0.720 6 43770966 missense variant G/A snv 62
rs1333049
CDKN2B-AS1
0.614 0.520 9 22125504 intron variant G/C snv 0.41 60
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv 78
rs1570360
VEGFA
0.641 0.680 6 43770093 upstream gene variant A/G snv 0.76 38
rs1799724
LTA ; TNF
0.600 0.680 6 31574705 upstream gene variant C/T snv 8.5E-02 47
rs1800795
IL6-AS1 ; IL6 ; STEAP1B
0.494 0.840 7 22727026 intron variant C/G snv 0.71 140
rs1800871
IL19 ; IL10
0.508 0.800 1 206773289 5 prime UTR variant A/G snv 0.69 108
rs1800896
IL19 ; IL10
0.507 0.800 1 206773552 intron variant T/C snv 0.41 113
rs1805192
PPARG
0.510 0.840 3 12379739 missense variant C/G snv 121
rs20417
PACERR ; PTGS2
0.576 0.600 1 186681189 non coding transcript exon variant C/G;T snv 57
rs2233678
PIN1 ; LOC100996288
0.732 0.360 19 9834503 non coding transcript exon variant G/A;C snv 14
rs2234693
ESR1
0.555 0.680 6 151842200 intron variant T/C snv 0.47 77
rs2274756
MMP9 ; SLC12A5-AS1
0.851 0.200 20 46014472 missense variant G/A;C snv 4
rs2278749
ARNTL
0.882 0.160 11 13376331 intron variant C/T snv 0.15 3
rs2279357
CYP11A1
0.851 0.160 15 74338282 intron variant T/C snv 0.69 5
rs2306074
ARNTL2-AS1 ; ARNTL2
0.882 0.160 12 27402853 intron variant T/C snv 0.37 3
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs4950928
CHI3L1
0.653 0.560 1 203186754 upstream gene variant G/A;C;T snv 33
rs531564
LINC00599 ; MIR124-1
0.672 0.480 8 9903189 non coding transcript exon variant G/C snv 0.14 27
rs689466
PACERR ; PTGS2
0.637 0.640 1 186681619 upstream gene variant T/C snv 0.17 33