Disease: Arthritis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1477353313
ACR
0.925 0.120 22 50744085 missense variant T/G snv 2
rs204989
GPSM3
0.925 0.120 6 32194075 intron variant G/A snv 0.21 2
rs204991
GPSM3
0.882 0.200 6 32193589 intron variant T/C snv 0.21 3
rs3890733
VDR
0.882 0.120 12 47895590 intron variant C/T snv 0.27 3
rs4760648
VDR
0.851 0.200 12 47886882 intron variant C/A;G;T snv 4
rs1234315
TNFSF4
0.807 0.400 1 173209324 upstream gene variant C/T snv 0.57 6
rs3789604
RSBN1 ; AP4B1-AS1
0.776 0.360 1 113812320 synonymous variant T/A;C;G snv 8.5E-06; 1.3E-05; 0.17 9
rs1057523354
COL4A1
0.763 0.480 13 110179387 missense variant C/A snv 13
rs10499194 0.752 0.400 6 137681500 intron variant C/T snv 0.24 10
rs1143679
ITGAM
0.732 0.520 16 31265490 missense variant G/A snv 9.7E-02 0.11 14
rs879761216
CNR2
0.732 0.480 1 23875429 frameshift variant TT/C;T delins 14
rs2501432
CNR2
0.716 0.480 1 23875430 missense variant T/C;G snv 0.62 16
rs35761398
CNR2
0.701 0.520 1 23875429 missense variant TT/CC mnv 19
rs13277113
BLK
0.695 0.520 8 11491677 intron variant G/A snv 0.25 18
rs2230926
TNFAIP3
0.662 0.440 6 137874929 missense variant T/C;G snv 4.0E-06; 5.4E-02 27
rs1061622
TNFRSF1B
0.633 0.760 1 12192898 missense variant T/G snv 0.22 0.22 33
rs1800925
IL13 ; TH2LCRR
0.627 0.560 5 132657117 non coding transcript exon variant C/G;T snv 37
rs3743930
MEFV
0.611 0.720 16 3254626 missense variant C/G;T snv 7.1E-02 43
rs755622
MIF-AS1 ; MIF
0.611 0.720 22 23894205 intron variant G/C snv 0.26 44
rs61752717
MEFV
0.583 0.840 16 3243407 missense variant T/A;C snv 2.8E-04 72
rs7975232
VDR
0.576 0.760 12 47845054 intron variant C/A snv 0.51 0.55 56
rs7574865
STAT4
0.574 0.720 2 191099907 intron variant T/G snv 0.79 59
rs2070600
AGER
0.561 0.760 6 32183666 missense variant C/T snv 5.3E-02 3.6E-02 82
rs5743708
TLR2
0.525 0.800 4 153705165 missense variant G/A snv 1.7E-02 1.8E-02 98
rs2228570
VDR
0.521 0.760 12 47879112 start lost A/C;G;T snv 0.63 99