Disease: Lupus Erythematosus, Systemic
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2422345
LOC100506023 ; TNFSF4
0.851 0.160 1 173368608 upstream gene variant G/A snv 0.63 4
rs2430561
IFNG ; IFNG-AS1
0.590 0.760 12 68158742 intron variant T/A snv 0.36 50
rs2431098 0.827 0.240 5 160460329 intron variant A/G;T snv 5
rs2523589 0.851 0.200 6 31359557 upstream gene variant G/A;T snv 4
rs2596501
HLA-B
0.882 0.200 6 31353434 intron variant C/T snv 0.57 3
rs2596560 0.851 0.280 6 31387541 intergenic variant T/C snv 0.22 4
rs2647012 0.790 0.320 6 32696681 intergenic variant T/C snv 0.64 7
rs2736337 0.827 0.240 8 11484371 upstream gene variant T/C snv 0.26 5
rs2736340 0.683 0.480 8 11486464 upstream gene variant C/T snv 0.25 22
rs2844511 0.807 0.200 6 31422007 intron variant A/G;T snv 10
rs2844635 0.882 0.200 6 31107704 downstream gene variant A/G snv 0.37 3
rs2855812
MICB
0.790 0.360 6 31504943 intron variant G/T snv 0.23 13
rs2858331 0.827 0.240 6 32713500 upstream gene variant A/G snv 0.42 5
rs2900180
C5-OT1
0.827 0.280 9 120944104 regulatory region variant T/A;C snv 5
rs3027898
IRAK1
0.752 0.360 X 154010439 downstream gene variant C/A snv 11
rs3077
HLA-DPA1
0.701 0.440 6 33065245 3 prime UTR variant A/G snv 0.29 16
rs3087456
CIITA ; LOC105371080
0.742 0.480 16 10877045 intron variant G/A snv 0.53 14
rs3115553
TSBP1-AS1
0.851 0.200 6 32278050 intron variant C/T snv 0.25 4
rs3115663
PRRC2A ; MIR6832
0.827 0.360 6 31634066 non coding transcript exon variant T/C snv 0.17 7
rs3117103
TSBP1-AS1
0.925 0.120 6 32381780 intron variant A/T snv 9.6E-02 2
rs3117582
BAG6 ; APOM
0.716 0.440 6 31652743 intron variant T/G snv 7.1E-02 14
rs3129890 0.827 0.280 6 32446496 downstream gene variant T/A;C snv 5
rs3129939
TSBP1-AS1 ; TSBP1
0.827 0.360 6 32368989 intron variant A/G snv 0.14 5
rs3129943
TSBP1-AS1 ; TSBP1
0.851 0.240 6 32370918 intron variant A/G snv 0.26 4
rs3129963 0.851 0.280 6 32412431 downstream gene variant A/G snv 0.17 4