DisGeNET - a database of gene-disease associations

List of shared variants

Malignant neoplasm of breast, C0006142

Disease: Breast Carcinoma

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1012477	PER3	0.827	0.160	1	7798075	intron variant	G/C	snv		0.16	8
rs1039659576	MTR	0.689	0.520	1	236803473	missense variant	A/G	snv			21
rs1047840	EXO1	0.708	0.280	1	241878999	missense variant	G/A	snv	0.36	0.40	19
rs1051740	EPHX1	0.592	0.760	1	225831932	missense variant	T/C	snv	0.32	0.27	56
rs1061217	SLAMF1	0.882	0.080	1	160610225	3 prime UTR variant	A/C;G	snv			3
rs1061622	TNFRSF1B	0.633	0.760	1	12192898	missense variant	T/G	snv	0.22	0.22	33
rs1061624	TNFRSF1B	0.776	0.320	1	12207208	3 prime UTR variant	A/G	snv		0.48	8
rs10754339	VTCN1	0.882	0.120	1	117147650	3 prime UTR variant	G/A	snv	0.88	0.76	3
rs10801935	VTCN1	0.925	0.080	1	117179265	intron variant	C/A;G	snv			2
rs10889677	IL23R	0.627	0.720	1	67259437	3 prime UTR variant	C/A	snv		0.27	40
rs10912580	TNFSF4 ; LOC100506023	0.882	0.080	1	173287411	intergenic variant	A/G	snv		0.21	3
rs11249433	EMBP1	0.827	0.160	1	121538815	intron variant	A/C;G	snv			9
rs1136410	PARP1	0.559	0.760	1	226367601	missense variant	A/G	snv	0.21	0.15	70
rs1137100	LEPR	0.627	0.640	1	65570758	missense variant	A/G	snv	0.30	0.25	39
rs1137101	LEPR	0.554	0.760	1	65592830	missense variant	A/G	snv	0.51	0.50	77
rs114101502	TUT4	0.925	0.080	1	52459928	intron variant	G/A;C	snv			2
rs11552449	AP4B1 ; DCLRE1B	0.925	0.080	1	113905767	missense variant	C/G;T	snv	0.22	0.15	4
rs116197192	MDM4	0.925	0.080	1	204538255	missense variant	A/G	snv	4.4E-04	4.7E-04	2
rs1172398253	CCN1	0.925	0.080	1	85582045	missense variant	C/T	snv	4.0E-06		4
rs11801299	LOC105371692	0.807	0.200	1	204559956	downstream gene variant	G/A	snv		0.16	9
rs11807619	HSD11B1-AS1 ; HSD11B1	0.925	0.080	1	209708028	intron variant	G/T	snv		0.17	2
rs1194591889	AGT	0.925	0.080	1	230710112	missense variant	C/T	snv	4.0E-06		2
rs1205	CRP	0.602	0.680	1	159712443	3 prime UTR variant	C/T	snv		0.30	46
rs12075	CADM3-AS1 ; ACKR1	0.724	0.240	1	159205564	missense variant	G/A	snv	0.51	0.66	22
rs12118297		0.925	0.080	1	87313534	intergenic variant	G/T	snv		0.19	2