DisGeNET - a database of gene-disease associations

List of shared variants

Malignant neoplasm of breast, C0006142

Disease: Breast Carcinoma

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1003623	ATM	0.925	0.080	11	108281855	intron variant	C/G;T	snv			2
rs10043985		0.925	0.080	5	111065770	upstream gene variant	A/C	snv		5.2E-02	2
rs1004982	LOC112268146 ; CYP19A1	0.925	0.080	15	51321614	non coding transcript exon variant	T/C;G	snv			2
rs10057194	XRCC4	0.925	0.080	5	83362752	intergenic variant	A/G	snv		0.16	2
rs10077427	POLK	0.925	0.080	5	75542076	intron variant	A/G	snv		0.13	2
rs10145182	NIN	0.925	0.080	14	50809291	intron variant	T/A;C;G	snv			2
rs10169372	LOC101928278	0.925	0.080	2	217006626	intergenic variant	A/G;T	snv			2
rs1017105	CLDN12 ; LOC112267985	0.925	0.080	7	90413990	3 prime UTR variant	C/T	snv		0.29	2
rs1017226	MAP3K1	0.925	0.080	5	56857565	intron variant	T/C	snv		5.8E-02	2
rs10175338	CYP1B1-AS1 ; CYP1B1	0.925	0.080	2	38080501	intron variant	G/T	snv		0.25	2
rs1020475809	NQO1	0.925	0.080	16	69711027	synonymous variant	A/G	snv	2.0E-05	7.0E-06	2
rs1029946	PRKAG2	0.925	0.080	7	151578720	intron variant	A/G	snv		0.21	2
rs1033662	LINC01524 ; LOC105372666	0.925	0.080	20	52408842	intron variant	A/G	snv		0.46	2
rs1034794		0.925	0.080	7	124801348	intergenic variant	A/T	snv		0.69	2
rs1042638	TPD52	0.925	0.080	8	80037711	3 prime UTR variant	G/A;T	snv			2
rs1042839	PGR	0.925	0.080	11	101051471	synonymous variant	G/A	snv	0.13	0.11	2
rs10439478	ACYP2	0.925	0.080	2	54232313	intron variant	A/C;G;T	snv			2
rs1044484322	CASP8	0.925	0.080	2	201271565	missense variant	T/A;G	snv	4.0E-06		2
rs1045012	ARPC1B	0.925	0.080	7	99386731	missense variant	G/C	snv	5.6E-02	7.8E-02	2
rs10463297	SRA1	0.925	0.080	5	140556654	intron variant	T/C	snv		0.29	2
rs10472076		0.925	0.080	5	58888234	regulatory region variant	T/A;C	snv			2
rs10474352	ARRDC3-AS1	0.925	0.080	5	91436408	intron variant	C/T	snv		0.23	2
rs10477313	PPP2R2B	0.925	0.080	5	146854076	intron variant	C/T	snv		0.17	2
rs1047769	ERCC5 ; BIVM-ERCC5	0.925	0.080	13	102861594	missense variant	A/G	snv	3.0E-02	2.5E-02	2
rs1048249612	CHEK1	0.925	0.080	11	125629291	missense variant	G/A	snv			2