Disease: Inflammatory Bowel Diseases
Source: GWASCAT ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1517352
STAT4
0.851 0.160 2 191066738 intron variant A/C snv 0.45 3
rs17780256
LOC105371887 ; SLC39A11
0.827 0.120 17 72646784 3 prime UTR variant A/C snv 0.18 6
rs2382817
PNKD ; TMBIM1
0.925 0.040 2 218286495 5 prime UTR variant A/C snv 0.61 3
rs6017342
LINC01620
0.925 0.120 20 44436388 non coding transcript exon variant A/C snv 0.62 2
rs12720356
TYK2
0.752 0.360 19 10359299 missense variant A/C;G snv 6.1E-02; 4.0E-06 7
rs1801274
FCGR2A
0.597 0.800 1 161509955 missense variant A/C;G snv 4.0E-06; 0.48 7
rs798502
AMZ1 ; GNA12
1.000 0.040 7 2750246 intron variant A/C;G snv 4
rs10761659 0.925 0.040 10 62685804 intron variant A/G snv 0.43 3
rs11548656
PLCG2
1.000 0.040 16 81883307 missense variant A/G snv 2.5E-02 2.7E-02 2
rs11741861
ZNF300 ; IRGM
0.925 0.040 5 150898347 intron variant A/G snv 8.8E-02 3
rs13407913
ADCY3
0.827 0.120 2 24874775 intron variant A/G snv 0.54 6
rs17622378
IRF1-AS1
0.790 0.200 5 132442760 intron variant A/G snv 0.28 8
rs1893217
PTPN2
0.742 0.440 18 12809341 intron variant A/G snv 0.12 10
rs2111485 0.724 0.280 2 162254026 regulatory region variant A/G snv 0.46 12
rs2284553
IFNGR2
0.776 0.240 21 33404389 intron variant A/G snv 0.69 6
rs2538470 0.827 0.120 7 148523356 intergenic variant A/G snv 0.61 6
rs2816958
NR5A2
0.827 0.120 1 200132792 intron variant A/G snv 0.84 6
rs34920465 0.807 0.160 1 22373858 intergenic variant A/G snv 0.24 7
rs6740847 0.925 0.040 2 181443625 intergenic variant A/G snv 0.57 8
rs6927022
HLA-DQA1 ; LOC107986589
1.000 0.040 6 32644620 non coding transcript exon variant A/G snv 0.42 2
rs7240004 1.000 0.040 18 48868651 intergenic variant A/G snv 0.43 2
rs7608910
PUS10
0.827 0.120 2 60977721 intron variant A/G snv 0.37 6
rs7657746
KIAA1109
0.925 0.040 4 122240464 intron variant A/G snv 0.24 3
rs10800309 0.925 0.120 1 161502368 upstream gene variant A/G;T snv 2
rs12942547
STAT3
0.807 0.200 17 42375526 intron variant A/G;T snv 6