Disease: Malignant tumor of colon
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10741657
CYP2R1
0.637 0.520 11 14893332 upstream gene variant A/G snv 0.65 34
rs10759932
TLR4
0.732 0.560 9 117702866 upstream gene variant T/C snv 0.18 15
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs12778366
SIRT1
0.724 0.480 10 67883321 upstream gene variant T/C;G snv 13
rs12785878
NADSYN1
0.677 0.520 11 71456403 intron variant G/A;T snv 25
rs14035
RAN
0.742 0.320 12 130876696 3 prime UTR variant C/T snv 0.33 15
rs1501299
ADIPOQ ; ADIPOQ-AS1
0.597 0.720 3 186853334 intron variant G/C;T snv 52
rs174537
TMEM258 ; MYRF
0.708 0.400 11 61785208 non coding transcript exon variant G/T snv 0.28 23
rs1800469
B9D2 ; TGFB1
0.547 0.760 19 41354391 intron variant A/G snv 0.69 78
rs1800797
IL6 ; IL6-AS1 ; STEAP1B
0.605 0.800 7 22726602 non coding transcript exon variant A/G snv 0.72 43
rs1801157
CXCL12
0.611 0.600 10 44372809 3 prime UTR variant C/T snv 0.16 46
rs1805192
PPARG
0.510 0.840 3 12379739 missense variant C/G snv 121
rs2010963
VEGFA
0.542 0.840 6 43770613 5 prime UTR variant C/G snv 0.68 82
rs2282679
GC
0.645 0.480 4 71742666 intron variant T/G snv 0.21 38
rs266729
ADIPOQ
0.637 0.560 3 186841685 upstream gene variant C/A;G;T snv 37
rs2735940
TERT
0.689 0.400 5 1296371 upstream gene variant A/G snv 0.49 25
rs3742330
DICER1
0.662 0.640 14 95087025 3 prime UTR variant A/G snv 8.7E-02 24
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs4950928
CHI3L1
0.653 0.560 1 203186754 upstream gene variant G/A;C;T snv 33
rs6918698
CCN2
0.851 0.200 6 131952117 intron variant G/A;C snv 5
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs7799039
LOC105375494
0.649 0.560 7 128238730 upstream gene variant G/A;C snv 33
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs9651118
MTHFR
0.683 0.480 1 11802157 intron variant T/C snv 0.18 20