Disease: Malignant tumor of colon
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs3730089
PIK3R1
0.827 0.280 5 68292320 missense variant G/A snv 0.18 0.22 5
rs6918698
CCN2
0.851 0.200 6 131952117 intron variant G/A;C snv 5
rs1799853
CYP2C9
0.763 0.320 10 94942290 missense variant C/T snv 9.2E-02 8.9E-02 11
rs12778366
SIRT1
0.724 0.480 10 67883321 upstream gene variant T/C;G snv 13
rs10759932
TLR4
0.732 0.560 9 117702866 upstream gene variant T/C snv 0.18 15
rs14035
RAN
0.742 0.320 12 130876696 3 prime UTR variant C/T snv 0.33 15
rs9651118
MTHFR
0.683 0.480 1 11802157 intron variant T/C snv 0.18 20
rs1805097
IRS2
0.689 0.360 13 109782884 missense variant C/G;T snv 0.35 22
rs174537
TMEM258 ; MYRF
0.708 0.400 11 61785208 non coding transcript exon variant G/T snv 0.28 23
rs3742330
DICER1
0.662 0.640 14 95087025 3 prime UTR variant A/G snv 8.7E-02 24
rs12785878
NADSYN1
0.677 0.520 11 71456403 intron variant G/A;T snv 25
rs2735940
TERT
0.689 0.400 5 1296371 upstream gene variant A/G snv 0.49 25
rs4950928
CHI3L1
0.653 0.560 1 203186754 upstream gene variant G/A;C;T snv 33
rs7799039
LOC105375494
0.649 0.560 7 128238730 upstream gene variant G/A;C snv 33
rs10741657
CYP2R1
0.637 0.520 11 14893332 upstream gene variant A/G snv 0.65 34
rs3804100
TLR2
0.633 0.720 4 153704257 synonymous variant T/C snv 9.0E-02 6.7E-02 36
rs266729
ADIPOQ
0.637 0.560 3 186841685 upstream gene variant C/A;G;T snv 37
rs1801278
IRS1
0.637 0.560 2 226795828 missense variant C/G;T snv 4.0E-06; 5.2E-02 38
rs2282679
GC
0.645 0.480 4 71742666 intron variant T/G snv 0.21 38
rs1800797
IL6 ; IL6-AS1 ; STEAP1B
0.605 0.800 7 22726602 non coding transcript exon variant A/G snv 0.72 43
rs1801157
CXCL12
0.611 0.600 10 44372809 3 prime UTR variant C/T snv 0.16 46
rs1501299
ADIPOQ ; ADIPOQ-AS1
0.597 0.720 3 186853334 intron variant G/C;T snv 52
rs2236225
MTHFD1
0.614 0.640 14 64442127 missense variant G/A snv 0.44 0.38 52
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs4994
ADRB3
0.578 0.640 8 37966280 missense variant A/G snv 0.11 9.2E-02 65