Disease: Adult Glioblastoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs200187877
PPARGC1A
0.851 0.040 4 23795829 missense variant C/T snv 8.0E-06 7.0E-06 4
rs121913529
KRAS
0.492 0.680 12 25245350 missense variant C/A;G;T snv 4.0E-06 144
rs1381537616
HOXA10 ; HOXA9 ; HOXA10-HOXA9
0.851 0.040 7 27174132 missense variant C/T snv 4
rs1805015
IL4R
0.683 0.520 16 27362859 missense variant T/C snv 0.16 0.22 22
rs1801275
IL4R
0.581 0.680 16 27363079 missense variant A/G snv 0.25 0.36 58
rs2017309
CHEK2
0.851 0.040 22 28735438 intron variant T/A snv 0.23 4
rs766265850
MIR4640 ; DDR1
0.851 0.040 6 30889239 missense variant G/A snv 8.1E-06 7.0E-06 4
rs1029044314
DDR1
0.851 0.040 6 30898095 missense variant G/A snv 4
rs1340827343
TCF19 ; POU5F1
0.851 0.040 6 31165259 missense variant C/T snv 4
rs572480837
POU5F1 ; TCF19
0.851 0.040 6 31165582 missense variant T/A snv 5.0E-04 8.4E-05 4
rs771563543
ZEB1
0.851 0.040 10 31510841 missense variant G/A snv 4.0E-06 1.4E-05 5
rs121912438
SOD1
0.605 0.520 21 31667299 missense variant G/A;C;T snv 1.2E-05; 8.0E-06 58
rs74315452
SOD1
0.732 0.160 21 31667356 missense variant T/C snv 12
rs1135401891
BRCA2
0.790 0.280 13 32332796 frameshift variant -/CT ins 7
rs11571833
BRCA2
0.608 0.360 13 32398489 stop gained A/T snv 6.6E-03 6.0E-03 43
rs1957106
NFKBIA
0.851 0.040 14 35404564 synonymous variant G/A snv 0.28 0.25 4
rs1800734
EPM2AIP1 ; MLH1
0.653 0.400 3 36993455 5 prime UTR variant G/A snv 0.22 30
rs865880036
MEIS2
0.827 0.040 15 37098156 missense variant A/C snv 1.3E-04 5
rs745542298
TP73
0.807 0.080 1 3732781 missense variant G/A;T snv 8.6E-06; 4.3E-06 2.1E-05 6
rs769809364
TP73
0.807 0.080 1 3732940 missense variant G/A snv 8.5E-06 1.4E-05 7
rs1306185959
FGFR1
0.851 0.040 8 38429805 missense variant T/C snv 7.0E-06 4
rs1801320
RAD51 ; RAD51-AS1
0.742 0.160 15 40695330 5 prime UTR variant G/C snv 0.12 15
rs2234248
LOC105375056 ; TREM2
0.827 0.040 6 41163980 upstream gene variant A/G snv 2.2E-03 5
rs1982073
TGFB1
0.649 0.640 19 41353016 missense variant G/A;C snv 32
rs2293157
STAT5A
0.763 0.120 17 42300657 intron variant C/A;T snv 9