Disease: Adult Glioblastoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs12885300
DIO2 ; DIO2-AS1
0.790 0.200 14 80211923 5 prime UTR variant C/A;G;T snv 7
rs1306185959
FGFR1
0.851 0.040 8 38429805 missense variant T/C snv 7.0E-06 4
rs13181
KLC3 ; ERCC2
0.487 0.760 19 45351661 stop gained T/A;G snv 4.0E-06; 0.32 134
rs1320938886
BLZF1
0.851 0.040 1 169376605 missense variant T/G snv 4.0E-06 4
rs1340827343
TCF19 ; POU5F1
0.851 0.040 6 31165259 missense variant C/T snv 4
rs1373481065
GADD45A
0.827 0.040 1 67687668 missense variant A/G snv 4.0E-06 6
rs1381537616
HOXA10 ; HOXA9 ; HOXA10-HOXA9
0.851 0.040 7 27174132 missense variant C/T snv 4
rs1444669684
CDKN2B-AS1 ; CDKN2A
0.658 0.480 9 21994285 missense variant C/A;T snv 36
rs144551722 0.851 0.040 X 43632629 intergenic variant G/A snv 0.13 4
rs1453633223
CDKN2A
0.807 0.080 9 21974503 missense variant C/T snv 4.0E-06 6
rs149840192
EGFR
0.807 0.080 7 55154129 missense variant C/A;T snv 7
rs16906252
MGMT
0.732 0.200 10 129467281 synonymous variant C/T snv 5.5E-02 5.1E-02 19
rs1695
GSTP1
0.457 0.880 11 67585218 missense variant A/G snv 0.34 0.36 188
rs17296479 0.851 0.040 5 81411157 non coding transcript exon variant T/A snv 9.4E-02 5
rs1800734
EPM2AIP1 ; MLH1
0.653 0.400 3 36993455 5 prime UTR variant G/A snv 0.22 30
rs1800925
IL13 ; TH2LCRR
0.627 0.560 5 132657117 non coding transcript exon variant C/G;T snv 37
rs1801275
IL4R
0.581 0.680 16 27363079 missense variant A/G snv 0.25 0.36 58
rs1801320
RAD51 ; RAD51-AS1
0.742 0.160 15 40695330 5 prime UTR variant G/C snv 0.12 15
rs1805015
IL4R
0.683 0.520 16 27362859 missense variant T/C snv 0.16 0.22 22
rs1957106
NFKBIA
0.851 0.040 14 35404564 synonymous variant G/A snv 0.28 0.25 4
rs1982073
TGFB1
0.649 0.640 19 41353016 missense variant G/A;C snv 32
rs200187877
PPARGC1A
0.851 0.040 4 23795829 missense variant C/T snv 8.0E-06 7.0E-06 4
rs2010963
VEGFA
0.542 0.840 6 43770613 5 prime UTR variant C/G snv 0.68 82
rs2017309
CHEK2
0.851 0.040 22 28735438 intron variant T/A snv 0.23 4
rs2234248
LOC105375056 ; TREM2
0.827 0.040 6 41163980 upstream gene variant A/G snv 2.2E-03 5