DisGeNET - a database of gene-disease associations

List of shared variants

Obesity, C0028754

Disease: Malignant neoplasm of breast

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	Num. diseases
rs1042522	TP53	0.426	0.800	17	7676154	missense variant	G/C;T	snv	0.67	242
rs1042714	ADRB2	0.597	0.640	5	148826910	stop gained	G/C;T	snv	0.68	54
rs1121980	FTO	0.807	0.240	16	53775335	intron variant	G/A;C	snv		18
rs1131691014	TP53	0.439	0.800	17	7676154	frameshift variant	-/C	ins		214
rs1188383936	F2	0.524	0.760	11	46725976	missense variant	C/T	snv	8.0E-06	102
rs12255372	TCF7L2	0.667	0.480	10	113049143	intron variant	G/A;T	snv		28
rs1232898090	PPARA	0.637	0.600	22	46198429	missense variant	G/C;T	snv	4.0E-06; 4.0E-06	40
rs1267969615	ACE	0.532	0.760	17	63490960	missense variant	T/C	snv	4.0E-06	100
rs1271572	ESR2	0.708	0.400	14	64295199	intron variant	A/C;T	snv		16
rs1289543302	ABCB1	0.763	0.440	7	87536472	missense variant	C/T	snv		12
rs1501299	ADIPOQ ; ADIPOQ-AS1	0.597	0.720	3	186853334	intron variant	G/C;T	snv		52
rs1544410	VDR	0.542	0.760	12	47846052	intron variant	C/A;G;T	snv		78
rs17817449	FTO	0.716	0.560	16	53779455	intron variant	T/A;G	snv		21
rs1799983	NOS3	0.430	0.880	7	150999023	missense variant	T/A;G	snv	0.75	246
rs1800234	PPARA	0.807	0.240	22	46219983	missense variant	T/A;C	snv	4.0E-06; 1.1E-02	6
rs1800470	TGFB1	0.515	0.840	19	41353016	missense variant	G/A;C	snv	0.55; 2.4E-04	107
rs1801278	IRS1	0.637	0.560	2	226795828	missense variant	C/G;T	snv	4.0E-06; 5.2E-02	38
rs1805097	IRS2	0.689	0.360	13	109782884	missense variant	C/G;T	snv	0.35	22
rs1805192	PPARG	0.510	0.840	3	12379739	missense variant	C/G	snv		121
rs1982073	TGFB1	0.649	0.640	19	41353016	missense variant	G/A;C	snv		32
rs2032582	ABCB1	0.538	0.800	7	87531302	missense variant	A/C;T	snv	0.54; 3.8E-02	97
rs2228611	DNMT1	0.708	0.520	19	10156401	synonymous variant	T/A;C	snv	0.52	19
rs2231142	ABCG2	0.583	0.680	4	88131171	missense variant	G/C;T	snv	4.0E-06; 0.12	56
rs2241766	ADIPOQ ; ADIPOQ-AS1	0.608	0.720	3	186853103	synonymous variant	T/C;G	snv	8.0E-06; 0.13	48
rs266729	ADIPOQ	0.637	0.560	3	186841685	upstream gene variant	C/A;G;T	snv		37