DisGeNET - a database of gene-disease associations

List of shared variants

Obesity, C0028754

Disease: Malignant neoplasm of breast

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF GENOME	Num. diseases
rs10146997	NRXN3	0.827	0.240	14	79478819	intron variant	A/G	snv	0.25	6
rs10811661		0.724	0.400	9	22134095	intergenic variant	T/C	snv	0.14	22
rs10895068	PGR ; PGR-AS1	0.752	0.240	11	101129483	5 prime UTR variant	C/T	snv	3.6E-02	14
rs1121980	FTO	0.807	0.240	16	53775335	intron variant	G/A;C	snv		18
rs1131691014	TP53	0.439	0.800	17	7676154	frameshift variant	-/C	ins		214
rs1143623	IL1B	0.677	0.440	2	112838252	upstream gene variant	C/G	snv	0.24	29
rs12255372	TCF7L2	0.667	0.480	10	113049143	intron variant	G/A;T	snv		28
rs1256046734	LEPR	0.763	0.280	1	65621409	missense variant	A/G	snv	7.0E-06	12
rs1271572	ESR2	0.708	0.400	14	64295199	intron variant	A/C;T	snv		16
rs1289543302	ABCB1	0.763	0.440	7	87536472	missense variant	C/T	snv		12
rs13188458		0.882	0.160	5	8127718	intergenic variant	T/G	snv	0.22	4
rs1333048	CDKN2B-AS1	0.683	0.320	9	22125348	intron variant	A/C	snv	0.44	24
rs1477196	FTO	0.851	0.200	16	53774346	intron variant	A/G	snv	0.71	7
rs1501299	ADIPOQ ; ADIPOQ-AS1	0.597	0.720	3	186853334	intron variant	G/C;T	snv		52
rs1544410	VDR	0.542	0.760	12	47846052	intron variant	C/A;G;T	snv		78
rs17782313		0.683	0.480	18	60183864	intergenic variant	T/C	snv	0.24	34
rs17817449	FTO	0.716	0.560	16	53779455	intron variant	T/A;G	snv		21
rs1799724	LTA ; TNF	0.600	0.680	6	31574705	upstream gene variant	C/T	snv	8.5E-02	47
rs1800795	IL6-AS1 ; IL6 ; STEAP1B	0.494	0.840	7	22727026	intron variant	C/G	snv	0.71	140
rs1800796	IL6-AS1 ; STEAP1B ; IL6	0.555	0.760	7	22726627	non coding transcript exon variant	G/C	snv	9.9E-02	74
rs1800797	IL6 ; IL6-AS1 ; STEAP1B	0.605	0.800	7	22726602	non coding transcript exon variant	A/G	snv	0.72	43
rs1805192	PPARG	0.510	0.840	3	12379739	missense variant	C/G	snv		121
rs1982073	TGFB1	0.649	0.640	19	41353016	missense variant	G/A;C	snv		32
rs2075356	GHRL ; GHRLOS	0.882	0.160	3	10287125	non coding transcript exon variant	T/C	snv	8.3E-02	5
rs2234693	ESR1	0.555	0.680	6	151842200	intron variant	T/C	snv	0.47	77