Disease: Inflammatory Bowel Diseases
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs17780256
LOC105371887 ; SLC39A11
0.827 0.120 17 72646784 3 prime UTR variant A/C snv 0.18 6
rs12720356
TYK2
0.752 0.360 19 10359299 missense variant A/C;G snv 6.1E-02; 4.0E-06 12
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs1250546
ZMIZ1
0.925 0.080 10 79272775 intron variant A/G snv 0.36 3
rs13407913
ADCY3
0.827 0.120 2 24874775 intron variant A/G snv 0.54 6
rs17622378
IRF1-AS1
0.790 0.200 5 132442760 intron variant A/G snv 0.28 8
rs1800871
IL19 ; IL10
0.508 0.800 1 206773289 5 prime UTR variant A/G snv 0.69 108
rs2111485 0.724 0.280 2 162254026 regulatory region variant A/G snv 0.46 17
rs2284553
IFNGR2
0.776 0.240 21 33404389 intron variant A/G snv 0.69 9
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs2538470 0.827 0.120 7 148523356 intergenic variant A/G snv 0.61 6
rs2816958
NR5A2
0.827 0.120 1 200132792 intron variant A/G snv 0.84 6
rs34920465 0.807 0.160 1 22373858 intergenic variant A/G snv 0.24 9
rs6478109
TNFSF15
0.752 0.320 9 114806486 upstream gene variant A/G snv 0.74 12
rs731236
VDR
0.542 0.760 12 47844974 synonymous variant A/G snv 0.33 0.34 81
rs7608910
PUS10
0.827 0.120 2 60977721 intron variant A/G snv 0.37 6
rs12942547
STAT3
0.807 0.200 17 42375526 intron variant A/G;T snv 7
rs2274907
ITLN1
0.851 0.200 1 160882036 missense variant A/G;T snv 0.66 5
rs259964
ZNF831
0.827 0.120 20 59249254 intron variant A/G;T snv 6
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs6863411
NDFIP1
0.827 0.120 5 142133639 intron variant A/T snv 0.67 6
rs5743293
NOD2
0.807 0.200 16 50729868 frameshift variant C/-;CC delins 7
rs10889677
IL23R
0.627 0.720 1 67259437 3 prime UTR variant C/A snv 0.27 40
rs11236797 0.790 0.200 11 76588605 upstream gene variant C/A snv 0.39 8
rs1847472
BACH2
0.807 0.200 6 90263440 intron variant C/A snv 0.25 7