Disease: Colorectal Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1549637
CABP5 ; PLA2G4C
0.925 0.120 19 48048700 intron variant A/T snv 0.72 3
rs2227947
MCC
0.925 0.120 5 113064094 missense variant G/A;T snv 0.61 0.50 2
rs2227948
MCC
0.925 0.120 5 113043592 synonymous variant G/A;T snv 0.53; 4.0E-06 2
rs368705607
MIXL1
0.882 0.120 1 226225766 missense variant T/C;G snv 2.8E-05; 4.0E-06 7
rs4848306 0.851 0.120 2 112840530 non coding transcript exon variant G/A snv 0.39 6
rs9944880
DCC
0.882 0.120 18 53125996 intron variant G/A snv 5.3E-02 3
rs3116496
CD28
0.776 0.160 2 203729789 intron variant T/C snv 0.15 0.14 11
rs3813867
LOC107984284 ; CYP2E1
0.732 0.240 10 133526101 intron variant G/A;C snv 13
rs419598
IL1RN
0.742 0.280 2 113129630 synonymous variant T/C snv 0.26 0.21 13
rs115707823 0.701 0.320 6 30374976 intergenic variant G/A snv 19
rs2229080
DCC
0.742 0.320 18 52906232 missense variant C/A;G snv 0.45 16
rs334558
LOC107986119 ; GSK3B
0.701 0.320 3 120094435 upstream gene variant A/G snv 0.51 20
rs4444903
EGF
0.630 0.360 4 109912954 5 prime UTR variant A/G snv 0.51 35
rs1143623
IL1B
0.677 0.440 2 112838252 upstream gene variant C/G snv 0.24 29
rs1799990
PRNP
0.683 0.440 20 4699605 missense variant A/G snv 0.31 0.33 23
rs1800947
CRP
0.683 0.440 1 159713648 splice region variant C/A;G;T snv 4.4E-05; 5.1E-02; 4.0E-06 28
rs2228001
XPC
0.570 0.480 3 14145949 missense variant G/T snv 0.63 0.65 60
rs9651118
MTHFR
0.683 0.480 1 11802157 intron variant T/C snv 0.18 20
rs25531
SLC6A4 ; LOC105371720
0.581 0.520 17 30237328 upstream gene variant T/C snv 0.18 72
rs4950928
CHI3L1
0.653 0.560 1 203186754 upstream gene variant G/A;C;T snv 33
rs7799039
LOC105375494
0.649 0.560 7 128238730 upstream gene variant G/A;C snv 33
rs1050450
GPX1
0.623 0.600 3 49357401 missense variant G/A snv 0.28 0.30 43
rs1258159645
NQO1
0.630 0.600 16 69711128 missense variant G/A snv 7.0E-06 37
rs2236225
MTHFD1
0.614 0.640 14 64442127 missense variant G/A snv 0.44 0.38 52
rs4994
ADRB3
0.578 0.640 8 37966280 missense variant A/G snv 0.11 9.2E-02 65