DisGeNET - a database of gene-disease associations

List of shared variants

Schizophrenia, C0036341

Disease: Colorectal Carcinoma

Source: ALL

Results per page

Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs2227947	MCC	0.925	0.120	5	113064094	missense variant	G/A;T	snv	0.61	0.50	2
rs2227948	MCC	0.925	0.120	5	113043592	synonymous variant	G/A;T	snv	0.53; 4.0E-06		2
rs1549637	CABP5 ; PLA2G4C	0.925	0.120	19	48048700	intron variant	A/T	snv		0.72	3
rs9944880	DCC	0.882	0.120	18	53125996	intron variant	G/A	snv		5.3E-02	3
rs4848306		0.851	0.120	2	112840530	non coding transcript exon variant	G/A	snv		0.39	6
rs368705607	MIXL1	0.882	0.120	1	226225766	missense variant	T/C;G	snv	2.8E-05; 4.0E-06		7
rs3116496	CD28	0.776	0.160	2	203729789	intron variant	T/C	snv	0.15	0.14	11
rs3813867	LOC107984284 ; CYP2E1	0.732	0.240	10	133526101	intron variant	G/A;C	snv			13
rs419598	IL1RN	0.742	0.280	2	113129630	synonymous variant	T/C	snv	0.26	0.21	13
rs2229080	DCC	0.742	0.320	18	52906232	missense variant	C/A;G	snv	0.45		16
rs115707823		0.701	0.320	6	30374976	intergenic variant	G/A	snv			19
rs334558	LOC107986119 ; GSK3B	0.701	0.320	3	120094435	upstream gene variant	A/G	snv		0.51	20
rs9651118	MTHFR	0.683	0.480	1	11802157	intron variant	T/C	snv		0.18	20
rs1799990	PRNP	0.683	0.440	20	4699605	missense variant	A/G	snv	0.31	0.33	23
rs1800947	CRP	0.683	0.440	1	159713648	splice region variant	C/A;G;T	snv	4.4E-05; 5.1E-02; 4.0E-06		28
rs1143623	IL1B	0.677	0.440	2	112838252	upstream gene variant	C/G	snv		0.24	29
rs4950928	CHI3L1	0.653	0.560	1	203186754	upstream gene variant	G/A;C;T	snv			33
rs7799039	LOC105375494	0.649	0.560	7	128238730	upstream gene variant	G/A;C	snv			33
rs4444903	EGF	0.630	0.360	4	109912954	5 prime UTR variant	A/G	snv		0.51	35
rs1258159645	NQO1	0.630	0.600	16	69711128	missense variant	G/A	snv		7.0E-06	37
rs1050450	GPX1	0.623	0.600	3	49357401	missense variant	G/A	snv	0.28	0.30	43
rs1205	CRP	0.602	0.680	1	159712443	3 prime UTR variant	C/T	snv		0.30	46
rs1143627	IL1B	0.605	0.760	2	112836810	5 prime UTR variant	G/A	snv		0.56	47
rs758272654	GNAS	0.611	0.680	20	58909201	synonymous variant	T/C	snv	4.0E-06	7.0E-06	50
rs1501299	ADIPOQ ; ADIPOQ-AS1	0.597	0.720	3	186853334	intron variant	G/C;T	snv			52