Disease: Multiple Sclerosis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs11209026
IL23R
0.597 0.680 1 67240275 missense variant G/A snv 4.2E-02 4.6E-02 46
rs11465804
IL23R
0.752 0.320 1 67236843 intron variant T/G snv 4.4E-02 5.4E-02 10
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs2205960
TNFSF4
0.763 0.400 1 173222336 intergenic variant G/A;T snv 9
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs6679677
PHTF1
0.653 0.320 1 113761186 upstream gene variant C/A snv 6.7E-02 26
rs1143634
IL1B
0.597 0.680 2 112832813 synonymous variant G/A snv 0.19 0.19 52
rs16944
IL1B
0.531 0.920 2 112837290 upstream gene variant A/G snv 0.57 92
rs17235409
SLC11A1
0.653 0.600 2 218395009 missense variant G/A;C snv 4.9E-02; 4.1E-06 31
rs17561
IL1A
0.672 0.560 2 112779646 missense variant C/A snv 0.27 0.26 23
rs1800587
IL1A
0.620 0.720 2 112785383 upstream gene variant G/A;C snv 0.32 43
rs231775
CTLA4
0.504 0.720 2 203867991 missense variant A/G;T snv 0.42; 4.0E-06 115
rs7574865
STAT4
0.574 0.720 2 191099907 intron variant T/G snv 0.79 59
rs6793295
LRRC34
0.827 0.240 3 169800667 missense variant T/C;G snv 0.37; 1.8E-04 6
rs10516487
BANK1
0.752 0.360 4 101829919 missense variant G/A;T snv 0.26; 8.0E-06 11
rs6822844 0.689 0.520 4 122588266 regulatory region variant G/T snv 0.10 20
rs7665090
MANBA
0.807 0.280 4 102630446 downstream gene variant A/G snv 0.55 6
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs10499194 0.752 0.400 6 137681500 intron variant C/T snv 0.24 10
rs3093023
LOC105378122 ; CCR6
0.851 0.160 6 167120802 intron variant G/A snv 0.34 7
rs3129871
HLA-DRA
0.827 0.320 6 32438565 upstream gene variant A/C snv 0.59 5
rs3129882
HLA-DRA
0.807 0.240 6 32441753 intron variant G/A snv 0.56 6
rs6457617 0.763 0.480 6 32696074 intergenic variant C/A;T snv 11
rs6920220 0.742 0.440 6 137685367 intron variant G/A snv 0.16 14
rs10488631
TNPO3
0.742 0.280 7 128954129 upstream gene variant T/C snv 9.0E-02 13