Disease: Multiple Sclerosis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs11860650
ITGAM
0.882 0.120 16 31315385 intron variant C/T snv 0.14 3
rs4963128
PHRF1
0.882 0.120 11 589564 intron variant T/C snv 0.64 3
rs3129871
HLA-DRA
0.827 0.320 6 32438565 upstream gene variant A/C snv 0.59 5
rs35929052 0.827 0.160 16 85960878 downstream gene variant C/G;T snv 5
rs3129882
HLA-DRA
0.807 0.240 6 32441753 intron variant G/A snv 0.56 6
rs6793295
LRRC34
0.827 0.240 3 169800667 missense variant T/C;G snv 0.37; 1.8E-04 6
rs7665090
MANBA
0.807 0.280 4 102630446 downstream gene variant A/G snv 0.55 6
rs3093023
LOC105378122 ; CCR6
0.851 0.160 6 167120802 intron variant G/A snv 0.34 7
rs11594656 0.776 0.240 10 6080046 intergenic variant T/A snv 0.18 9
rs2205960
TNFSF4
0.763 0.400 1 173222336 intergenic variant G/A;T snv 9
rs10499194 0.752 0.400 6 137681500 intron variant C/T snv 0.24 10
rs11465804
IL23R
0.752 0.320 1 67236843 intron variant T/G snv 4.4E-02 5.4E-02 10
rs117026326
LOC101926943 ; GTF2I
0.752 0.440 7 74711703 intron variant C/T snv 1.3E-02 10
rs2294020
CCDC22
0.763 0.280 X 49246763 missense variant A/G;T snv 10
rs10516487
BANK1
0.752 0.360 4 101829919 missense variant G/A;T snv 0.26; 8.0E-06 11
rs3027898
IRAK1
0.752 0.360 X 154010439 downstream gene variant C/A snv 11
rs5844572
MIF ; MIF-AS1
0.752 0.360 22 23893562 intron variant -/ATTC delins 11
rs6457617 0.763 0.480 6 32696074 intergenic variant C/A;T snv 11
rs10488631
TNPO3
0.742 0.280 7 128954129 upstream gene variant T/C snv 9.0E-02 13
rs2304256
TYK2
0.732 0.360 19 10364976 missense variant C/A snv 0.27 0.23 13
rs6920220 0.742 0.440 6 137685367 intron variant G/A snv 0.16 14
rs13277113
BLK
0.695 0.520 8 11491677 intron variant G/A snv 0.25 18
rs4728142 0.732 0.320 7 128933913 upstream gene variant G/A snv 0.38 18
rs6822844 0.689 0.520 4 122588266 regulatory region variant G/T snv 0.10 20
rs763361
CD226
0.689 0.520 18 69864406 missense variant T/A;C snv 4.0E-06; 0.52 21