DisGeNET - a database of gene-disease associations

List of shared variants

Squamous cell carcinoma of lung, C0149782

Disease: Adenocarcinoma of lung (disorder)

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1057941	GBAP1	0.701	0.280	1	155216951	non coding transcript exon variant	G/A;T	snv	0.46		18
rs11119608	KCNH1	0.708	0.280	1	210816167	intron variant	T/G	snv		0.21	17
rs144594252	DDR2	0.882	0.080	1	162754625	missense variant	C/G	snv	6.8E-05	5.6E-05	3
rs186507655		0.708	0.280	1	1351675	upstream gene variant	G/A	snv		6.8E-03	17
rs2974935	MTX1	0.708	0.280	1	155212052	non coding transcript exon variant	G/A;C;T	snv			17
rs1057519920	NFE2L2	0.790	0.160	2	177234232	missense variant	C/A;G;T	snv			7
rs1057519921	NFE2L2	0.763	0.240	2	177234231	missense variant	T/C	snv			10
rs1057519922	NFE2L2	0.790	0.200	2	177234082	missense variant	C/G;T	snv			7
rs1057519923	NFE2L2	0.807	0.200	2	177234081	missense variant	T/A	snv			6
rs1057519924	NFE2L2	0.807	0.200	2	177234080	missense variant	C/A	snv			6
rs104886003	PIK3CA	0.562	0.440	3	179218303	missense variant	G/A;C	snv	4.0E-06		71
rs1052133	OGG1 ; CAMK1	0.476	0.800	3	9757089	missense variant	C/G	snv	0.27	0.22	147
rs1057519925	PIK3CA	0.683	0.560	3	179210291	missense variant	G/A;C	snv			25
rs1057519926	PIK3CA	0.776	0.200	3	179210293	missense variant	A/T	snv			10
rs1057519927	PIK3CA	0.716	0.240	3	179218295	missense variant	A/C;G;T	snv			19
rs1057519928	PIK3CA	0.807	0.200	3	179221147	missense variant	A/C	snv			8
rs1057519932	PIK3CA	0.683	0.320	3	179234298	missense variant	T/G	snv			22
rs11375254	TP63	0.882	0.080	3	189625454	intergenic variant	A/-;AA;AAA;AAAA	delins			3
rs121913273	PIK3CA	0.605	0.440	3	179218294	missense variant	G/A;C	snv			44
rs121913274	PIK3CA	0.645	0.320	3	179218304	missense variant	A/C;G;T	snv			33
rs121913275	PIK3CA	0.672	0.320	3	179218305	missense variant	G/A;C;T	snv	4.0E-06		26
rs121913279	PIK3CA	0.526	0.560	3	179234297	missense variant	A/G;T	snv	4.0E-06; 4.0E-06		101
rs121913281	PIK3CA	0.623	0.520	3	179234296	missense variant	C/T	snv			37
rs481519	NEK10	0.708	0.280	3	27285723	intron variant	C/A;T	snv			17
rs75316749	LOC107986051	0.701	0.280	3	169043635	intergenic variant	A/G	snv		4.2E-02	18