DisGeNET - a database of gene-disease associations

List of shared variants

Squamous cell carcinoma of lung, C0149782

Disease: Adenocarcinoma of lung (disorder)

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs141752671		0.708	0.280	11	103745837	intron variant	A/G	snv		5.4E-03	17
rs148883465		0.708	0.280	11	103813371	intron variant	A/G	snv		7.2E-03	17
rs7679673		0.677	0.440	4	105140377	intron variant	C/A	snv		0.50	28
rs3184504	SH2B3 ; ATXN2	0.572	0.600	12	111446804	missense variant	T/A;C;G	snv	0.67		92
rs397507546	PTPN11	0.790	0.360	12	112489084	missense variant	G/A;C;T	snv			9
rs11200014	FGFR2	0.695	0.280	10	121575416	intron variant	G/A;T	snv		0.34	19
rs7725218	TERT	0.708	0.280	5	1282299	intron variant	G/A	snv		0.38	17
rs401681	CLPTM1L	0.620	0.640	5	1321972	intron variant	C/T	snv		0.48	42
rs186507655		0.708	0.280	1	1351675	upstream gene variant	G/A	snv		6.8E-03	17
rs121913355	BRAF	0.641	0.520	7	140781602	missense variant	C/A;G;T	snv	4.0E-06		42
rs121913357	BRAF	0.742	0.320	7	140781603	stop gained	C/A;G;T	snv			12
rs121913351	BRAF	0.776	0.240	7	140781611	missense variant	C/A;G;T	snv	4.0E-06		9
rs1057519895	FBXW7	0.724	0.240	4	152328232	missense variant	C/A;G;T	snv			17
rs867384286	FBXW7	0.732	0.240	4	152328233	missense variant	G/A;C	snv	4.3E-06		14
rs2974935	MTX1	0.708	0.280	1	155212052	non coding transcript exon variant	G/A;C;T	snv			17
rs1057941	GBAP1	0.701	0.280	1	155216951	non coding transcript exon variant	G/A;T	snv	0.46		18
rs144594252	DDR2	0.882	0.080	1	162754625	missense variant	C/G	snv	6.8E-05	5.6E-05	3
rs75316749	LOC107986051	0.701	0.280	3	169043635	intergenic variant	A/G	snv		4.2E-02	18
rs4808075	BABAM1 ; USHBP1	0.701	0.280	19	17279482	intron variant	T/C	snv		0.26	18
rs1057519924	NFE2L2	0.807	0.200	2	177234080	missense variant	C/A	snv			6
rs1057519923	NFE2L2	0.807	0.200	2	177234081	missense variant	T/A	snv			6
rs1057519922	NFE2L2	0.790	0.200	2	177234082	missense variant	C/G;T	snv			7
rs1057519921	NFE2L2	0.763	0.240	2	177234231	missense variant	T/C	snv			10
rs1057519920	NFE2L2	0.790	0.160	2	177234232	missense variant	C/A;G;T	snv			7
rs1057519925	PIK3CA	0.683	0.560	3	179210291	missense variant	G/A;C	snv			25