Disease: Low density lipoprotein cholesterol measurement
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs157580
TOMM40
0.882 0.160 19 44892009 intron variant G/A snv 0.69 14
rs1800961
HNF4A
0.851 0.160 20 44413724 missense variant C/T snv 3.1E-02 2.5E-02 21
rs2244608
HNF1A ; HNF1A-AS1
0.882 0.160 12 120979185 intron variant A/G snv 0.29 9
rs3817588
GCKR
0.882 0.160 2 27508345 intron variant T/C snv 0.14 7
rs651007 0.851 0.160 9 133278431 upstream gene variant T/A;C snv 22
rs174546
FADS1 ; FADS2
0.807 0.200 11 61802358 3 prime UTR variant C/T snv 0.28 17
rs2650000
HNF1A-AS1
0.851 0.200 12 120951159 intron variant A/C snv 0.70 10
rs495828 0.827 0.200 9 133279294 upstream gene variant T/G snv 0.81 24
rs10401969
SUGP1
0.776 0.240 19 19296909 intron variant T/C snv 0.10 25
rs646776
CELSR2
0.752 0.240 1 109275908 downstream gene variant C/T snv 0.74 25
rs6857
NECTIN2
0.790 0.240 19 44888997 3 prime UTR variant C/T snv 0.13 16
rs780093
GCKR
0.763 0.240 2 27519736 intron variant T/C snv 0.68 30
rs579459 0.752 0.320 9 133278724 upstream gene variant C/T snv 0.81 28
rs2075650
TOMM40
0.662 0.360 19 44892362 intron variant A/G snv 0.13 0.13 45
rs2228603
NCAN
0.790 0.360 19 19219115 missense variant C/A;T snv 2.8E-05; 5.9E-02 12
rs780094
GCKR
0.658 0.400 2 27518370 intron variant T/C snv 0.67 62
rs11887534
ABCG5 ; ABCG8
0.653 0.440 2 43839108 missense variant G/A;C snv 6.4E-06; 6.7E-02 29
rs405509
APOE
0.667 0.480 19 44905579 upstream gene variant T/G snv 0.58 30
rs4420638
APOC1
0.708 0.520 19 44919689 downstream gene variant A/G snv 0.18 43
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 81
rs429358
APOE
0.590 0.600 19 44908684 missense variant T/C snv 0.14 0.16 66