Disease: Low density lipoprotein cholesterol measurement
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 81
rs1800961
HNF4A
0.851 0.160 20 44413724 missense variant C/T snv 3.1E-02 2.5E-02 21
rs2228603
NCAN
0.790 0.360 19 19219115 missense variant C/A;T snv 2.8E-05; 5.9E-02 12
rs429358
APOE
0.590 0.600 19 44908684 missense variant T/C snv 0.14 0.16 66
rs2285810
HECTD4
12 112261736 non coding transcript exon variant T/C snv 0.45 2
rs2287921
RASIP1
1.000 0.040 19 48725015 non coding transcript exon variant T/C snv 0.37 4
rs4841132
LOC157273
8 9326086 non coding transcript exon variant A/G snv 0.89 14
rs769449
APOE
0.882 0.120 19 44906745 non coding transcript exon variant G/A snv 8.4E-02 11
rs9987289
LOC157273
1.000 0.040 8 9325848 non coding transcript exon variant A/G snv 0.87 10
rs174546
FADS1 ; FADS2
0.807 0.200 11 61802358 3 prime UTR variant C/T snv 0.28 17
rs629301
CELSR2
0.851 0.120 1 109275684 3 prime UTR variant G/T snv 0.74 22
rs6857
NECTIN2
0.790 0.240 19 44888997 3 prime UTR variant C/T snv 0.13 16
rs405509
APOE
0.667 0.480 19 44905579 upstream gene variant T/G snv 0.58 30
rs495828 0.827 0.200 9 133279294 upstream gene variant T/G snv 0.81 24
rs579459 0.752 0.320 9 133278724 upstream gene variant C/T snv 0.81 28
rs649129 1.000 0.080 9 133278860 upstream gene variant T/C;G snv 10
rs651007 0.851 0.160 9 133278431 upstream gene variant T/A;C snv 22
rs661955 1 234707109 upstream gene variant G/C;T snv 3
rs12711751 2 113080188 downstream gene variant T/G snv 0.61 2
rs4420638
APOC1
0.708 0.520 19 44919689 downstream gene variant A/G snv 0.18 43
rs646776
CELSR2
0.752 0.240 1 109275908 downstream gene variant C/T snv 0.74 25