DisGeNET - a database of gene-disease associations

List of shared variants

Malignant neoplasm of lung, C0242379

Disease: Non-Small Cell Lung Carcinoma

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs4919510	SEMA4G ; MIR608 ; MRPL43	0.641	0.520	10	100975021	mature miRNA variant	C/G	snv	0.27	0.27	32
rs1416580204	MOK	0.608	0.720	14	102250837	missense variant	C/T	snv	4.0E-06	7.0E-06	49
rs751402	ERCC5 ; BIVM-ERCC5	0.724	0.360	13	102845848	5 prime UTR variant	A/G	snv		0.76	15
rs1047768	ERCC5 ; BIVM-ERCC5	0.695	0.320	13	102852167	synonymous variant	T/C	snv	0.52	0.59	20
rs17655	BIVM-ERCC5 ; ERCC5	0.597	0.560	13	102875652	missense variant	G/C	snv	0.28	0.30	52
rs745564626	XRCC3 ; KLC1	0.752	0.280	14	103699003	missense variant	C/G;T	snv	4.3E-05		14
rs861539	KLC1 ; XRCC3	0.519	0.680	14	103699416	missense variant	G/A	snv	0.29	0.30	104
rs121434592	AKT1	0.595	0.640	14	104780214	missense variant	C/T	snv	4.0E-06		54
rs1273593548	PIK3CG	0.716	0.160	7	106867593	missense variant	T/G	snv	8.4E-06		19
rs1805388	LIG4	0.790	0.120	13	108211243	missense variant	G/A	snv	0.18	0.16	11
rs189037	ATM ; NPAT	0.689	0.400	11	108223106	5 prime UTR variant	G/A	snv		0.49	22
rs1878022	CMKLR1	0.851	0.080	12	108305255	intron variant	C/T	snv		0.70	4
rs4978754	ELP1	0.851	0.080	9	108884801	intron variant	T/C	snv		0.92	4
rs5744256	IL18	0.827	0.120	11	112152125	intron variant	A/G	snv		0.16	6
rs763375936	ATG3	0.827	0.160	3	112532749	missense variant	C/T	snv	8.3E-06	7.0E-06	5
rs772776695	ATG3	0.827	0.160	3	112548576	missense variant	T/A	snv	4.0E-06		5
rs7086803	VTI1A	0.763	0.160	10	112738717	intron variant	G/A	snv		0.20	9
rs1143634	IL1B	0.597	0.680	2	112832813	synonymous variant	G/A	snv	0.19	0.19	52
rs16944	IL1B	0.531	0.920	2	112837290	upstream gene variant	A/G	snv		0.57	92
rs1143623	IL1B	0.677	0.440	2	112838252	upstream gene variant	C/G	snv		0.24	29
rs751688663	ATG7	0.807	0.280	3	11340656	missense variant	G/A	snv	4.0E-06		7
rs12415607	CASP7	0.827	0.160	10	113678445	upstream gene variant	C/A	snv		0.22	7
rs2227310	CASP7	0.807	0.160	10	113729393	missense variant	C/G	snv	0.26	0.23	9
rs33917957	MET	0.790	0.120	7	116700208	missense variant	A/G	snv	2.7E-02	1.8E-02	10
rs397507444	MTHFR	0.405	0.880	1	11794407	missense variant	T/G	snv			306