Disease: Parkinson Disease
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2420616
GRK5
0.882 0.080 10 119316984 intron variant A/G snv 0.69 3
rs4752293
GRK5
0.882 0.080 10 119342186 intron variant C/T snv 0.74 3
rs8126696 0.882 0.080 21 37358422 intron variant T/C snv 0.64 3
rs1801474
PRKN
0.851 0.080 6 162201165 missense variant C/T snv 7.1E-02 5.3E-02 4
rs2281983
PITX3
0.851 0.080 10 102231624 missense variant G/A;C;T snv 0.62; 8.3E-06 4
rs6347
SLC6A3
0.851 0.080 5 1411297 synonymous variant T/C snv 0.23 0.32 4
rs201106962
SNCA
0.851 0.080 4 89828156 missense variant A/C snv 8.0E-05 7.0E-05 5
rs2306604
TFAM
0.827 0.080 10 58388932 intron variant A/C;G;T snv 5
rs3764435
ALDH1A1
0.827 0.120 9 72901960 intron variant A/C;T snv 5
rs11931074
SNCA ; LOC105377329
0.851 0.080 4 89718364 intron variant G/A;C;T snv 7
rs121909334
VCP
0.752 0.200 9 35065255 missense variant C/T snv 1.6E-05 10
rs767543900
MAPT
0.790 0.120 17 45971879 missense variant A/C;G snv 4.0E-06 10
rs121909330
VCP
0.752 0.200 9 35065364 missense variant G/A;C;T snv 11
rs242557
MAPT
0.752 0.200 17 45942346 intron variant G/A snv 0.36 12
rs104893875
SNCA
0.742 0.120 4 89828170 missense variant C/T snv 4.0E-06 13
rs367543041
TARDBP
0.742 0.200 1 11022553 missense variant G/A;C snv 3.0E-05 15
rs1044396
CHRNA4
0.742 0.240 20 63349782 missense variant G/A;C snv 0.47; 6.1E-05 17
rs5848
FAM171A2 ; GRN
0.708 0.120 17 44352876 3 prime UTR variant C/T snv 0.41 17
rs2230288
GBA
0.776 0.160 1 155236376 missense variant C/T snv 1.0E-02 1.0E-02 18
rs11136000
CLU
0.752 0.160 8 27607002 intron variant T/C snv 0.56 19
rs334558
LOC107986119 ; GSK3B
0.701 0.320 3 120094435 upstream gene variant A/G snv 0.51 20
rs1289324472
GBA
0.716 0.400 1 155236354 missense variant T/C snv 1.4E-05 21
rs33939927
LRRK2
0.708 0.120 12 40310434 missense variant C/A;G;T snv 4.0E-06; 1.2E-05 24
rs75932628
LOC105375056 ; TREM2
0.662 0.480 6 41161514 missense variant C/A;T snv 6.8E-05; 2.6E-03 28
rs76763715
GBA
0.658 0.520 1 155235843 missense variant T/C;G snv 2.3E-03 35