Disease: Liver carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1001179
CAT
0.641 0.680 11 34438684 upstream gene variant C/T snv 0.16 33
rs10053538
HAVCR2
0.807 0.160 5 157110499 intron variant C/A;T snv 7
rs10204525
PDCD1
0.701 0.440 2 241850169 3 prime UTR variant C/T snv 0.21 20
rs1043210477
GPX1
0.701 0.520 3 49358250 missense variant G/A snv 19
rs1045411
HMGB1
0.708 0.360 13 30459095 3 prime UTR variant C/T snv 0.20 18
rs10514231
ATG10
0.807 0.160 5 82011593 intron variant C/T snv 0.56 6
rs1056836
CYP1B1
0.581 0.680 2 38071060 missense variant G/C snv 0.51 58
rs1057519975
TP53
0.649 0.480 17 7675209 missense variant A/C;G;T snv 34
rs1057519981
TP53
0.689 0.440 17 7674251 missense variant A/C;G;T snv 22
rs1057520006
TP53
0.752 0.240 17 7673799 missense variant A/C;G;T snv 14
rs10877887
LINC01465 ; MIRLET7I
0.701 0.440 12 62603400 non coding transcript exon variant T/C snv 0.42 18
rs10889677
IL23R
0.627 0.720 1 67259437 3 prime UTR variant C/A snv 0.27 40
rs10932029
ICOS ; LOC101927840
0.827 0.200 2 203937045 intron variant T/A;C snv 5
rs11134527
MIR218-2 ; SLIT3
0.677 0.400 5 168768351 intron variant G/A snv 0.25 24
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs1143627
IL1B
0.605 0.760 2 112836810 5 prime UTR variant G/A snv 0.56 47
rs121913273
PIK3CA
0.605 0.440 3 179218294 missense variant G/A;C snv 44
rs12508721
IL21-AS1
0.742 0.360 4 122623509 intron variant C/T snv 0.24 11
rs12621038
ACYP2
0.882 0.120 2 54163976 intron variant C/T snv 0.16 3
rs132770
DESI1 ; XRCC6
0.752 0.320 22 41621260 5 prime UTR variant A/G snv 0.83 14
rs13347
CD44
0.763 0.320 11 35231725 3 prime UTR variant C/A;T snv 12
rs145204276
ZBTB37 ; SNORD74 ; SNORD75 ; GAS5 ; SNORD77 ; SNORA103 ; SNORD76
0.658 0.320 1 173868254 splice donor variant CAAGG/- delins 8.8E-02 31
rs1457582183
TP53
0.827 0.200 17 7673608 missense variant G/A;C snv 7.0E-06 5
rs1501299
ADIPOQ ; ADIPOQ-AS1
0.597 0.720 3 186853334 intron variant G/C;T snv 52
rs1570360
VEGFA
0.641 0.680 6 43770093 upstream gene variant A/G snv 0.76 38