DisGeNET - a database of gene-disease associations

List of shared variants

Breast Carcinoma, C0678222

Disease: Liver carcinoma

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs10053538	HAVCR2	0.807	0.160	5	157110499	intron variant	C/A;T	snv			7
rs10514231	ATG10	0.807	0.160	5	82011593	intron variant	C/T	snv		0.56	6
rs10932029	ICOS ; LOC101927840	0.827	0.200	2	203937045	intron variant	T/A;C	snv			5
rs11134527	MIR218-2 ; SLIT3	0.677	0.400	5	168768351	intron variant	G/A	snv		0.25	24
rs12508721	IL21-AS1	0.742	0.360	4	122623509	intron variant	C/T	snv		0.24	11
rs12621038	ACYP2	0.882	0.120	2	54163976	intron variant	C/T	snv		0.16	3
rs1501299	ADIPOQ ; ADIPOQ-AS1	0.597	0.720	3	186853334	intron variant	G/C;T	snv			52
rs17251221	CASR	0.724	0.360	3	122274400	intron variant	A/G	snv		0.11	18
rs17849071	PIK3CA	0.776	0.160	3	179218439	intron variant	T/G	snv		7.9E-02	8
rs1800896	IL19 ; IL10	0.507	0.800	1	206773552	intron variant	T/C	snv		0.41	113
rs184003	AGER	0.724	0.400	6	32182519	intron variant	C/A	snv	0.12	0.12	15
rs187115	CD44	0.695	0.320	11	35154612	intron variant	T/C	snv		0.37	22
rs1990172	MACC1	0.827	0.120	7	20164512	intron variant	A/C	snv		0.27	6
rs2069705	IFNG-AS1 ; IFNG	0.695	0.440	12	68161231	intron variant	G/A;C	snv			19
rs2070744	NOS3	0.608	0.680	7	150992991	intron variant	C/T	snv		0.70	54
rs2107425	MRPL23 ; H19	0.732	0.280	11	1999845	intron variant	C/T	snv			16
rs2221903	IL21-AS1 ; IL21	0.752	0.360	4	122617757	intron variant	C/T	snv		0.77	12
rs2267437	DESI1 ; XRCC6	0.724	0.320	22	41620695	intron variant	C/A;G	snv			19
rs2298881	ERCC1	0.653	0.400	19	45423658	intron variant	C/A;T	snv			25
rs2430561	IFNG ; IFNG-AS1	0.590	0.760	12	68158742	intron variant	T/A	snv		0.36	50
rs28381975	PDCD6IP ; LOC105377023	0.827	0.200	3	33798239	intron variant	-/TTACGTACCTGTGCA;TTCCGTACCTGTGCA;TTTCGTACCTGTGCA	delins			5
rs3116496	CD28	0.776	0.160	2	203729789	intron variant	T/C	snv	0.15	0.14	11
rs3761549	FOXP3	0.724	0.480	X	49260888	intron variant	G/A	snv		9.6E-02	18
rs3807987	CAV1	0.732	0.280	7	116539780	intron variant	G/A	snv		7.6E-02	17
rs4645981	CASP9 ; DNAJC16	0.790	0.160	1	15524988	intron variant	G/A;C	snv			11