Disease: Neoplasms
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10165970
NPAS2
0.708 0.320 2 100840527 intron variant G/A snv 0.16 18
rs17024869
NPAS2
0.708 0.320 2 100843581 intron variant T/C snv 8.3E-02 18
rs895520
NPAS2
0.689 0.320 2 100961475 intron variant G/A snv 0.35 23
rs7581886
NPAS2
0.708 0.320 2 100964784 intron variant C/T snv 0.92 18
rs2305160
NPAS2 ; NPAS2-AS1
0.776 0.200 2 100974842 missense variant A/G snv 0.71 0.75 9
rs4919510
SEMA4G ; MIR608 ; MRPL43
0.641 0.520 10 100975021 mature miRNA variant C/G snv 0.27 0.27 32
rs1408080623
PGR ; PGR-AS1
0.851 0.080 11 101128058 missense variant G/A snv 5
rs776880789
PGR ; PGR-AS1
0.925 0.080 11 101128241 missense variant G/C;T snv 4.7E-06; 4.7E-06 4
rs16405
BTRC
0.882 0.120 10 101553963 3 prime UTR variant AACAGTGGA/- del 0.31 4
rs7965399
LOC105369944
0.851 0.120 12 102497908 regulatory region variant T/A;C snv 5
rs147574894
NFKB1 ; LOC105377347
0.925 0.080 4 102600911 missense variant A/G snv 9.6E-05 3.9E-04 4
rs5498
ICAM4 ; ICAM1
0.531 0.760 19 10285007 missense variant A/G snv 0.44 0.37 99
rs1047768
ERCC5 ; BIVM-ERCC5
0.695 0.320 13 102852167 synonymous variant T/C snv 0.52 0.59 20
rs17655
BIVM-ERCC5 ; ERCC5
0.597 0.560 13 102875652 missense variant G/C snv 0.28 0.30 52
rs873601
BIVM-ERCC5 ; ERCC5
0.677 0.360 13 102875987 3 prime UTR variant G/A snv 0.59 25
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 104
rs121434592
AKT1
0.595 0.640 14 104780214 missense variant C/T snv 4.0E-06 54
rs1800056
ATM
0.882 0.120 11 108267276 missense variant T/C snv 8.7E-03 8.5E-03 6
rs1801516
ATM
0.627 0.400 11 108304735 missense variant G/A snv 0.11 0.11 39
rs3787016
POLR2E
0.677 0.280 19 1090804 intron variant A/G snv 0.78 24
rs768623239
GSTM1 ; GSTM2
0.662 0.640 1 109689278 missense variant A/G snv 1.5E-05 26
rs1805076
PPP2R1B
0.851 0.120 11 111764842 missense variant C/T snv 6.5E-03 7.0E-03 7
rs3783553
IL1A
0.667 0.480 2 112774138 3 prime UTR variant -/TGAA delins 26
rs454886
APC
0.763 0.280 5 112810420 intron variant A/G snv 0.26 10
rs1143623
IL1B
0.677 0.440 2 112838252 upstream gene variant C/G snv 0.24 29