Disease: Neoplasms
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10053538
HAVCR2
0.807 0.160 5 157110499 intron variant C/A;T snv 7
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 53
rs10090154 0.807 0.160 8 127519892 intergenic variant T/A;C snv 7
rs1011329790
GGCT
0.925 0.080 7 30504681 missense variant G/A snv 3
rs1012477
PER3
0.827 0.160 1 7798075 intron variant G/C snv 0.16 8
rs10165970
NPAS2
0.708 0.320 2 100840527 intron variant G/A snv 0.16 18
rs10204525
PDCD1
0.701 0.440 2 241850169 3 prime UTR variant C/T snv 0.21 20
rs10235235
ZNF394 ; ZNF789
0.925 0.080 7 99478208 intron variant T/C snv 0.13 4
rs1029342144
KLLN ; PTEN
0.882 0.120 10 87864162 5 prime UTR variant C/G;T snv 6
rs1045411
HMGB1
0.708 0.360 13 30459095 3 prime UTR variant C/T snv 0.20 18
rs10519097
RORA
0.708 0.320 15 60997989 intron variant C/T snv 0.13 18
rs1054016
TNFSF11
0.882 0.160 13 42607866 3 prime UTR variant G/T snv 0.35 4
rs1056836
CYP1B1
0.581 0.680 2 38071060 missense variant G/C snv 0.51 58
rs1057519847
EGFR
0.570 0.560 7 55191821 missense variant CT/AG mnv 72
rs1057519848
EGFR
0.570 0.560 7 55191822 missense variant TG/GT mnv 72
rs1057519975
TP53
0.649 0.480 17 7675209 missense variant A/C;G;T snv 34
rs1057520001
TP53
0.677 0.360 17 7674886 missense variant A/C;G snv 23
rs1060502346
BRCA1
0.925 0.080 17 43106513 missense variant A/G snv 3
rs10636
MT2A
0.851 0.160 16 56609431 3 prime UTR variant G/C snv 0.26 7
rs10735810
VDR
0.662 0.640 12 47879112 start lost A/C;G;T snv 26
rs10757278
CDKN2B-AS1
0.620 0.520 9 22124478 intron variant A/G snv 0.40 44
rs10838524
CRY2
0.851 0.120 11 45848626 intron variant A/G snv 0.42 5
rs10889677
IL23R
0.627 0.720 1 67259437 3 prime UTR variant C/A snv 0.27 40
rs10941679 0.763 0.120 5 44706396 intergenic variant A/G snv 0.25 11
rs1114167628
PTEN
0.925 0.080 10 87961033 stop gained -/ATATCTAG delins 5